Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MTP41_RS01820 Genome accession   NZ_CP094466
Coordinates   383796..385607 (+) Length   603 a.a.
NCBI ID   WP_249236058.1    Uniprot ID   -
Organism   Faecalibacterium sp. I4-3-84     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 378796..390607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTP41_RS01800 (MTP41_01800) - 379062..379718 (-) 657 WP_249236055.1 sortase -
  MTP41_RS01805 (MTP41_01805) - 379799..380782 (-) 984 WP_249236056.1 Na/Pi symporter -
  MTP41_RS01810 (MTP41_01810) - 380985..381491 (+) 507 WP_194173936.1 MarR family transcriptional regulator -
  MTP41_RS01815 (MTP41_01815) - 381488..383794 (+) 2307 WP_249236057.1 ABC transporter ATP-binding protein -
  MTP41_RS01820 (MTP41_01820) rcrQ 383796..385607 (+) 1812 WP_249236058.1 ABC transporter ATP-binding protein Regulator
  MTP41_RS01825 (MTP41_01825) - 385693..386616 (-) 924 WP_097777582.1 LysR family transcriptional regulator -
  MTP41_RS01830 (MTP41_01830) - 386790..388820 (+) 2031 WP_249236059.1 FAD-binding protein -
  MTP41_RS01835 (MTP41_01835) - 389022..389942 (+) 921 WP_249236060.1 MoxR family ATPase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 66751.10 Da        Isoelectric Point: 6.6210

>NTDB_id=669684 MTP41_RS01820 WP_249236058.1 383796..385607(+) (rcrQ) [Faecalibacterium sp. I4-3-84]
MPRPGRMTTERAKDFKGTLLQLVRTLGRYRLSLVTAIVFAILSTIFNIAGPKVLAKATTALATGWIAKLRGTGSIDFVYI
GRILLFLLGMYLLSSAFSFIQGWLMTGLSQKVCYDFRKQISEKINRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSIT
QLITSVTTMIGVLVMMLSISPKMTLIALLILPVSLALVLIVVKFSQKYFKAQQAILGVVNGQVEEVYSGHNVVKAFNREA
VVLNDFNAANDKLYESAWKSQFLSGLMMPIMNFVGNLGYVAVAIVGSIFAANGTITIGDIQAFIQYVKNFTQPIQQLSQV
SNMLQSMAAAAERVFEFLNEPEEDQQADPARRADPGCINGQVTFSHVRFGYTPEKTVIHDFSCEVKPGQKVAIVGPTGAG
KTTMVKLLMRFYDVDSGSITLNGHDVRDFDRSALREGFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAAAKAANADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARTILADNRILILDEATSSVDTRTEQRIQTAMDRLMEGRTSFVIAHRLSTI
RDADLILVMRDGDIVEQGTHDQLIEAGGFYADLYNSQFEDVVE

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=669684 MTP41_RS01820 WP_249236058.1 383796..385607(+) (rcrQ) [Faecalibacterium sp. I4-3-84]
ATGCCAAGACCCGGACGCATGACGACCGAACGCGCCAAGGACTTCAAGGGCACCCTGCTGCAGCTTGTGCGCACCCTTGG
CCGCTACCGCCTTTCGCTCGTTACCGCCATTGTATTTGCCATTCTTTCTACCATCTTCAATATTGCAGGCCCTAAGGTGC
TGGCAAAGGCCACCACGGCTCTTGCCACCGGCTGGATCGCCAAGCTGCGCGGCACCGGCAGCATCGACTTTGTGTATATC
GGCCGCATCCTGCTGTTTTTGCTGGGCATGTACCTGCTGAGCAGCGCCTTCAGCTTTATTCAGGGCTGGCTCATGACCGG
CCTTTCCCAGAAAGTCTGCTACGACTTCCGCAAGCAGATCAGCGAAAAGATCAACCGCCTGCCCCTTGCCTACTTTGAAA
AGCGCACCGTGGGCGAGGTGCTGTCCCGCATCACCAACGATGTGGACACGCTGGGCCAGAGCCTGAACCAGAGCATCACC
CAGCTCATCACTAGTGTGACCACCATGATCGGCGTGCTGGTCATGATGCTGTCCATCAGCCCGAAGATGACCCTGATCGC
CCTACTGATCCTGCCGGTCTCGCTGGCGCTGGTGCTCATCGTGGTCAAGTTCAGCCAGAAATACTTCAAGGCACAGCAGG
CCATTCTGGGCGTTGTGAACGGTCAGGTGGAAGAAGTCTACTCCGGCCACAACGTGGTCAAAGCCTTCAACCGCGAGGCC
GTGGTGCTGAACGACTTCAACGCCGCCAACGATAAGCTGTACGAATCCGCATGGAAGAGCCAGTTTCTCTCCGGCCTGAT
GATGCCCATTATGAACTTTGTGGGCAATCTGGGCTACGTGGCGGTGGCCATCGTGGGCAGCATTTTTGCGGCAAACGGCA
CCATTACCATCGGTGACATTCAGGCCTTCATCCAGTACGTCAAGAACTTCACCCAGCCCATCCAGCAGCTTTCTCAGGTG
TCCAACATGCTGCAGAGCATGGCCGCTGCCGCTGAGCGGGTGTTCGAGTTTCTGAACGAGCCGGAAGAGGATCAGCAGGC
AGACCCGGCCCGCCGGGCCGACCCCGGCTGCATCAACGGTCAGGTGACATTCAGCCATGTCCGCTTCGGCTATACGCCCG
AAAAGACCGTCATCCACGATTTCAGCTGTGAGGTCAAGCCCGGCCAGAAGGTGGCTATCGTCGGCCCTACCGGCGCGGGC
AAAACTACCATGGTCAAGCTGCTCATGCGCTTCTATGATGTTGATTCCGGTTCCATCACCCTGAATGGCCACGATGTGCG
TGACTTTGACCGCAGCGCCCTGCGCGAGGGCTTCGGCATGGTGCTGCAGGACACATGGCTGTTCAAGGGCACCATCATGG
AGAACATCCGCTATGGCCGTCTGGATGCTACCGACGAAGAAGTGATCGCCGCCGCCAAGGCTGCCAACGCCGACCACTTC
ATCCGCACCCTGCCCGGCGGCTACCAGATGGAGCTGAACGAAGACGCTTCCAACGTGAGTCAGGGCCAGAAGCAGCTGCT
CACCATCGCCCGCACCATTCTGGCAGATAACCGCATCCTAATTTTGGACGAGGCCACCAGCAGCGTGGATACCCGTACCG
AGCAGCGCATCCAAACCGCCATGGACCGCCTGATGGAGGGCCGCACCAGCTTTGTGATCGCACACCGTCTTTCCACCATC
CGGGATGCCGACCTCATCCTTGTGATGCGAGATGGCGACATTGTGGAGCAGGGCACCCACGACCAGCTGATCGAAGCAGG
CGGCTTCTACGCCGACCTGTACAACAGCCAGTTCGAGGACGTGGTGGAGTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(34-313)

ABC transporter (ABC_tran)

(379-527)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.596

97.347

0.493