Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG410_RS23515 Genome accession   NZ_CP109031
Coordinates   5397354..5398478 (-) Length   374 a.a.
NCBI ID   WP_329301012.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00659 strain NBC 00659     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5392354..5403478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG410_RS23490 (OG410_23510) cseB 5393134..5393838 (-) 705 WP_326786303.1 two-component system response regulator CseB -
  OG410_RS23495 (OG410_23515) - 5393858..5394508 (-) 651 WP_329301009.1 hypothetical protein -
  OG410_RS23500 (OG410_23520) - 5394496..5395035 (-) 540 WP_328449706.1 SigE family RNA polymerase sigma factor -
  OG410_RS23505 (OG410_23525) - 5395289..5396206 (-) 918 WP_329301010.1 A/G-specific adenine glycosylase -
  OG410_RS23510 (OG410_23530) - 5396399..5397238 (+) 840 WP_329301011.1 hypothetical protein -
  OG410_RS23515 (OG410_23535) disA 5397354..5398478 (-) 1125 WP_329301012.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG410_RS23520 (OG410_23540) radA/sms 5398547..5399956 (-) 1410 WP_329301013.1 DNA repair protein RadA Machinery gene
  OG410_RS23525 (OG410_23545) - 5400301..5402100 (+) 1800 WP_329301014.1 hypothetical protein -
  OG410_RS23530 (OG410_23550) - 5402248..5403015 (-) 768 WP_329304216.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40023.78 Da        Isoelectric Point: 5.0992

>NTDB_id=669645 OG410_RS23515 WP_329301012.1 5397354..5398478(-) (disA) [Streptomyces sp. NBC_00659 strain NBC 00659]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIHTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVGGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=669645 OG410_RS23515 WP_329301012.1 5397354..5398478(-) (disA) [Streptomyces sp. NBC_00659 strain NBC 00659]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGCGCCGATGGCCTGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCCCTGCGCGACGGGCTGGAACGGATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGCACGGGTGGATTCGTCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGT
GAACTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAAATCCTTCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACGATCCACACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTGTCGGTCTCCCAGTCGATGCGTCTGATCGCCCTGTACGTCGGCGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGTGCGAACCAGGCCCTCGCCACTCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTCGTCACGGTCCGGGACGTCTCCGCGGTCGCCCAGCGTCTGGAGATGGTGCGCCGTATCG
CCACCGAGATCGCCGAGTACGTGGTGGAACTGGGCACGGACGGGCGGCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCGCTCAGTCACGCCGAGCTCCTCGAACTGTCCACGGTGGCCAAGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCTCCGCGCGGGTTCCGTCTCCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTCCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGTGTCCGCGAGGGCCTGTCCCGTCTCGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438


Multiple sequence alignment