Detailed information NTG0066782

Bioinformatically predicted

Overview

• Name: rcrP
• Type: Regulator
• Locus tag: BL105A_RS08875
• Genome accession: NZ_AP014658
• Coordinates: 2125463..2127334 (-)
• Length: 623 a.a.
• NCBI ID: WP_041080944.1
• Uniprot ID: A0A4R0USI2
• Organism: Bifidobacterium longum strain 105-A
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	2127521..2139832	2125463..2127334	flank	187

Gene organization within MGE regions

Location: 2125463..2139832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL105A_RS08875 (BL105A_1844)	rcrP	2125463..2127334 (-)	1872	WP_041080944.1	ABC transporter ATP-binding protein	Regulator
BL105A_RS08880 (BL105A_1845)	-	2127521..2128042 (-)	522	WP_041080945.1	MarR family winged helix-turn-helix transcriptional regulator	-
BL105A_RS08885 (BL105A_1846)	-	2128404..2128967 (+)	564	WP_041080946.1	BRO family protein	-
BL105A_RS08890 (BL105A_1847)	-	2129463..2132603 (-)	3141	WP_414835662.1	bacterial Ig-like domain-containing protein	-
BL105A_RS10950	-	2132871..2132936 (-)	66	WP_349816200.1	hypothetical protein	-
BL105A_RS08895 (BL105A_1849)	-	2133510..2138051 (-)	4542	WP_041080947.1	exo-beta-1,6-galactobiohydrolase	-

Sequence

Protein

• Length: 623 a.a.
• Molecular weight: 68081.77 Da
• Isoelectric Point: 5.4594

>NTDB_id=66782 BL105A_RS08875 WP_041080944.1 2125463..2127334(-) (rcrP) [Bifidobacterium longum strain 105-A]
MLRIMKYLSKAEIGQMLIALVTIVGQVYFDLKLPDYMSDITTLVETPGSHMKDIWIAGGKMLLISLGSAACAIITGYIAA
RVAASFTQRLRSLEFRKVESFGPAEMSKFSTASLITRSTNDVTQVQMFITMGLQLIVKSPIMAVWAVCKIAGEGFEWTLA
TGIAVVILLAAIVIMMAMVMPKFKAMQALTDNINLVARENLTGLRVVRAYNAEDYQEAKFTKANKDLTDTQLFTNRVMAF
MMPLMNTIMNGLMLAVYWIGTYLIDAAGLKDKLTVFSNMVVFSNYSVQVIMSFLLMSMVFVLWPRADVSAQRIMEVLDTE
PIVENGTKTAADVAKTGQRGTVEFRNVSFTYPDSREAMLEGINFTAEQGQTVAFIGSTGSGKSSLINLMPRFYDTSQGQV
LVDGVDVRDYDLKTLRDKIGYVPQQSVLFKGTVASNVSYGDQPGDPAEVEMADTSTPAGRKREAALIAAGKAAEGADMPA
EQLNRIKAAVGVAQASEFVERMDGGYSAAIAQGGSNVSGGQKQRLSIARAVYRHPEILIFDDSFSALDFKTDREVRDALA
REAKDSTKLIVAQRIGTIMNADRIVVLDDGKVVGQGTHKELLDNCDVYRQIAESQLSQSELTA

Nucleotide

• Length: 1872 bp

>NTDB_id=66782 BL105A_RS08875 WP_041080944.1 2125463..2127334(-) (rcrP) [Bifidobacterium longum strain 105-A]
ATGCTTCGCATCATGAAATACCTCTCCAAAGCGGAGATCGGTCAGATGCTCATCGCTCTGGTGACCATCGTCGGGCAGGT
CTACTTCGACCTGAAACTGCCCGACTATATGTCAGACATCACCACGCTGGTCGAAACGCCGGGCAGCCACATGAAGGACA
TTTGGATTGCCGGCGGCAAGATGCTGCTCATCTCGCTCGGATCCGCGGCGTGTGCCATCATCACCGGCTACATCGCTGCG
CGCGTGGCGGCCTCGTTCACCCAGCGTCTGCGCTCGCTCGAATTCCGCAAGGTCGAGTCCTTCGGCCCGGCCGAAATGAG
CAAGTTCTCCACCGCCAGCCTCATCACCCGCTCCACCAACGACGTCACGCAGGTGCAGATGTTCATCACCATGGGTCTGC
AGCTCATCGTCAAATCGCCGATTATGGCAGTATGGGCCGTGTGCAAGATCGCCGGCGAAGGCTTCGAATGGACGCTCGCC
ACCGGAATCGCCGTAGTGATTCTGCTGGCGGCCATCGTCATCATGATGGCCATGGTCATGCCGAAATTCAAGGCCATGCA
GGCCCTGACCGACAACATCAACCTCGTGGCCCGCGAGAACCTCACCGGCCTGCGTGTGGTGCGCGCCTACAACGCCGAGG
ACTACCAGGAAGCCAAATTCACCAAGGCCAACAAGGACCTCACCGACACCCAGCTGTTCACCAACCGCGTCATGGCGTTC
ATGATGCCGCTGATGAACACCATCATGAACGGTCTGATGCTTGCCGTCTACTGGATCGGTACCTACCTGATCGATGCCGC
CGGGCTCAAGGACAAGCTCACCGTGTTCTCCAACATGGTGGTGTTCTCCAACTACTCCGTGCAGGTCATCATGAGCTTCC
TGCTCATGAGCATGGTGTTCGTGCTCTGGCCGCGCGCCGACGTGTCCGCGCAGCGCATCATGGAGGTACTCGACACCGAG
CCGATCGTCGAGAACGGCACCAAAACCGCCGCCGACGTGGCCAAAACCGGTCAGCGAGGCACCGTGGAATTCCGCAACGT
CAGCTTCACCTACCCGGATTCGCGCGAGGCGATGCTGGAAGGCATCAACTTCACCGCCGAGCAGGGCCAGACGGTGGCAT
TCATCGGTTCCACCGGCTCCGGCAAGTCGTCTCTTATCAATCTCATGCCGCGCTTCTATGACACCAGCCAAGGCCAGGTG
CTGGTCGACGGCGTGGACGTGCGCGACTACGACCTGAAGACCCTGCGCGACAAGATCGGCTACGTGCCGCAGCAGTCCGT
GCTGTTCAAGGGCACCGTGGCCTCCAACGTGAGCTACGGCGATCAGCCGGGCGACCCGGCGGAGGTCGAGATGGCCGATA
CCTCCACTCCGGCCGGGCGCAAGCGCGAGGCCGCGTTGATCGCCGCTGGCAAGGCTGCGGAAGGTGCCGATATGCCGGCC
GAGCAGCTGAATCGCATCAAGGCCGCGGTCGGCGTGGCCCAGGCCAGCGAATTCGTGGAGCGCATGGACGGCGGGTATTC
CGCCGCGATCGCCCAAGGCGGATCGAACGTGTCCGGCGGCCAGAAGCAGCGCCTGTCGATTGCGCGCGCGGTGTACCGTC
ACCCGGAAATCCTGATTTTCGACGACTCGTTCTCCGCGCTCGACTTCAAGACCGACCGCGAAGTGCGCGACGCGCTCGCC
CGCGAGGCTAAGGATTCCACCAAGCTCATCGTGGCCCAGCGCATCGGCACCATCATGAACGCCGATCGCATCGTCGTGCT
CGACGACGGCAAGGTCGTGGGTCAGGGCACGCACAAGGAACTGCTCGACAACTGCGACGTGTATCGCCAGATCGCCGAAT
CCCAGCTCAGCCAGTCGGAGCTTACGGCATAG

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (60-292)

• ABC transporter (ABC_tran) (359-543)

3D structure

• AlphaFold DB: A0A4R0USI2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrP	Streptococcus mutans UA159	48.499	100	0.493