Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG74_RS07235 | Genome accession | NZ_CP094120 |
| Coordinates | 1516824..1517087 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584971.1 | Uniprot ID | A0A0L0QIL1 |
| Organism | Helicobacter pylori strain Hpfe061 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1511824..1522087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG74_RS07220 (MPG74_07220) | - | 1512799..1514139 (-) | 1341 | WP_180451865.1 | hypothetical protein | - |
| MPG74_RS07230 (MPG74_07230) | comB4 | 1514459..1516822 (-) | 2364 | WP_245069391.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG74_RS07235 (MPG74_07235) | comB3 | 1516824..1517087 (-) | 264 | WP_000584971.1 | hypothetical protein | Machinery gene |
| MPG74_RS07240 (MPG74_07240) | comB2 | 1517087..1517368 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG74_RS07245 (MPG74_07245) | - | 1517513..1518340 (-) | 828 | WP_140446094.1 | DUF5718 family protein | - |
| MPG74_RS07250 (MPG74_07250) | - | 1518431..1519483 (-) | 1053 | WP_245069393.1 | MnmA/TRMU family protein | - |
| MPG74_RS07255 (MPG74_07255) | dnaG | 1519480..1521159 (-) | 1680 | WP_245069395.1 | DNA primase | - |
| MPG74_RS07260 (MPG74_07260) | groES | 1521434..1521790 (+) | 357 | WP_000671947.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10076.17 Da Isoelectric Point: 9.5507
>NTDB_id=667142 MPG74_RS07235 WP_000584971.1 1516824..1517087(-) (comB3) [Helicobacter pylori strain Hpfe061]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667142 MPG74_RS07235 WP_000584971.1 1516824..1517087(-) (comB3) [Helicobacter pylori strain Hpfe061]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCACTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCACTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
96.552 |
100 |
0.966 |