Detailed information NTG0066630

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IOMTU433_RS10355
• Genome accession: NZ_AP014649
• Coordinates: 2185164..2185865 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain IOMTU433
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2180164..2190865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IOMTU433_RS10325 (IOMTU433_2073)	-	2180471..2180914 (-)	444	WP_045544205.1	SRPBCC family protein	-
IOMTU433_RS10330 (IOMTU433_2074)	tadA	2180984..2181487 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
IOMTU433_RS10335 (IOMTU433_2075)	-	2181494..2182618 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
IOMTU433_RS10340 (IOMTU433_2076)	ung	2182615..2183328 (-)	714	WP_001177530.1	uracil-DNA glycosylase	-
IOMTU433_RS10345 (IOMTU433_2077)	-	2183379..2183975 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
IOMTU433_RS10350 (IOMTU433_2078)	gspK	2184205..2185164 (-)	960	WP_045544206.1	type II secretion system minor pseudopilin GspK	-
IOMTU433_RS10355 (IOMTU433_2079)	xcpW	2185164..2185865 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IOMTU433_RS10360 (IOMTU433_2080)	xcpV	2185865..2186245 (-)	381	WP_045544207.1	type II secretion system minor pseudopilin GspI	Machinery gene
IOMTU433_RS10365 (IOMTU433_2081)	-	2186235..2186789 (-)	555	WP_000841373.1	type II secretion system protein	-
IOMTU433_RS10370 (IOMTU433_2082)	-	2186799..2187407 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IOMTU433_RS10375 (IOMTU433_2083)	-	2187445..2188218 (-)	774	WP_000497298.1	TatD family hydrolase	-
IOMTU433_RS10380 (IOMTU433_2084)	-	2188236..2188577 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IOMTU433_RS10385 (IOMTU433_2085)	-	2188589..2189569 (-)	981	WP_045544208.1	DNA polymerase III subunit delta'	-
IOMTU433_RS10390 (IOMTU433_2086)	kdsB	2189581..2190342 (-)	762	WP_045544209.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=66630 IOMTU433_RS10355 WP_000594572.1 2185164..2185865(-) (xcpW) [Acinetobacter baumannii strain IOMTU433]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=66630 IOMTU433_RS10355 WP_000594572.1 2185164..2185865(-) (xcpW) [Acinetobacter baumannii strain IOMTU433]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991