Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | IOMTU433_RS01675 | Genome accession | NZ_AP014649 |
| Coordinates | 358471..358896 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain IOMTU433 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 353471..363896
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOMTU433_RS01665 (IOMTU433_0333) | pilY1 | 354125..357979 (+) | 3855 | WP_045543713.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| IOMTU433_RS01670 (IOMTU433_0334) | pilY2 | 357992..358474 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| IOMTU433_RS01675 (IOMTU433_0335) | pilE | 358471..358896 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| IOMTU433_RS01680 (IOMTU433_0336) | rpsP | 359043..359294 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| IOMTU433_RS01685 (IOMTU433_0337) | rimM | 359314..359862 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| IOMTU433_RS01690 (IOMTU433_0338) | trmD | 359908..360648 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| IOMTU433_RS01695 (IOMTU433_0339) | rplS | 360856..361224 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| IOMTU433_RS01700 (IOMTU433_0340) | - | 361276..362217 (-) | 942 | WP_085946156.1 | triacylglycerol lipase | - |
| IOMTU433_RS01705 (IOMTU433_0341) | - | 362332..363366 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=66621 IOMTU433_RS01675 WP_000788342.1 358471..358896(+) (pilE) [Acinetobacter baumannii strain IOMTU433]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=66621 IOMTU433_RS01675 WP_000788342.1 358471..358896(+) (pilE) [Acinetobacter baumannii strain IOMTU433]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |