Detailed information    

insolico Bioinformatically predicted

Overview

Name   codY   Type   Regulator
Locus tag   MOW09_RS18825 Genome accession   NZ_CP093928
Coordinates   3702390..3703169 (-) Length   259 a.a.
NCBI ID   WP_000421290.1    Uniprot ID   A0A9W5VKA1
Organism   Bacillus cereus strain AH7-7     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3697390..3708169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW09_RS18800 (MOW09_18800) uppS 3698139..3698915 (-) 777 WP_000971296.1 isoprenyl transferase -
  MOW09_RS18805 (MOW09_18805) frr 3699001..3699558 (-) 558 WP_000531501.1 ribosome recycling factor -
  MOW09_RS18810 (MOW09_18810) pyrH 3699561..3700283 (-) 723 WP_000042668.1 UMP kinase -
  MOW09_RS18815 (MOW09_18815) tsf 3700350..3701237 (-) 888 WP_001018578.1 translation elongation factor Ts -
  MOW09_RS18820 (MOW09_18820) rpsB 3701341..3702042 (-) 702 WP_000111485.1 30S ribosomal protein S2 -
  MOW09_RS18825 (MOW09_18825) codY 3702390..3703169 (-) 780 WP_000421290.1 GTP-sensing pleiotropic transcriptional regulator CodY Regulator
  MOW09_RS18830 (MOW09_18830) hslU 3703247..3704638 (-) 1392 WP_000550078.1 ATP-dependent protease ATPase subunit HslU -
  MOW09_RS18835 (MOW09_18835) hslV 3704661..3705203 (-) 543 WP_000526272.1 ATP-dependent protease proteolytic subunit HslV -
  MOW09_RS18840 (MOW09_18840) xerC 3705246..3706145 (-) 900 WP_001101243.1 tyrosine recombinase XerC -
  MOW09_RS18845 (MOW09_18845) trmFO 3706211..3707515 (-) 1305 WP_000213002.1 FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28793.05 Da        Isoelectric Point: 4.7165

>NTDB_id=665584 MOW09_RS18825 WP_000421290.1 3702390..3703169(-) (codY) [Bacillus cereus strain AH7-7]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENRELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLQELAKLKTN

Nucleotide


Download         Length: 780 bp        

>NTDB_id=665584 MOW09_RS18825 WP_000421290.1 3702390..3703169(-) (codY) [Bacillus cereus strain AH7-7]
ATGGAATTATTAGCAAAAACGAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGGAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCAAACGTATTCGTAGTTAGCCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAAAACGAACGCATGAAGCAAATGCTTGCAGAACGTCAATTCCCAGAAGAATATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTGAACAGTGCTTACACAGCATTCCCAGTAGAAAACAGAGAATTATTCGG
TCAAGGTTTAACTACAATCGTACCAATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTATTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATCCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATCTTACGTGAAAAAGCAGAA
GAAATCGAAGAGGAAGCGCGTAGTAAAGCTGTTGTTCAAATGGCAATCAGCTCATTATCTTACAGTGAGTTAGAAGCAAT
TGAGCATATCTTCGAAGAATTAAATGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGATCGCGTAGGAATTACTC
GCTCTGTAATCGTAAATGCACTACGTAAATTAGAAAGTGCTGGTGTTATTGAGTCTCGCTCTTTAGGTATGAAAGGAACA
TACATTAAAGTGCTAAACGACAAGTTTCTACAAGAACTTGCTAAATTAAAAACAAACTAA

Domains

Predicted by InterProScan.

CodY GAF-like domain (CodY)

(2-178)

CodY helix-turn-helix domain (HTH_CodY)

(198-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  codY Bacillus subtilis subsp. subtilis str. 168

81.467

100

0.815
  codY Lactococcus lactis subsp. lactis strain DGCC12653

46.667

98.456

0.459