Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   MQG44_RS00630 Genome accession   NZ_CP093912
Coordinates   114406..114927 (+) Length   173 a.a.
NCBI ID   WP_005562086.1    Uniprot ID   A0AAC8Y0V5
Organism   Aggregatibacter actinomycetemcomitans strain 14R     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 109406..119927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQG44_RS00590 tolQ 109542..110231 (+) 690 WP_005545584.1 protein TolQ -
  MQG44_RS00595 tolR 110317..110739 (+) 423 WP_005542289.1 colicin uptake protein TolR -
  MQG44_RS00600 tolA 110756..111904 (+) 1149 WP_005549166.1 cell envelope integrity protein TolA -
  MQG44_RS00605 tolB 111939..113219 (+) 1281 WP_005544509.1 Tol-Pal system beta propeller repeat protein TolB -
  MQG44_RS00610 pal 113234..113701 (+) 468 WP_005544510.1 peptidoglycan-associated lipoprotein Pal -
  MQG44_RS00630 comN 114406..114927 (+) 522 WP_005562086.1 type II secretion system protein Machinery gene
  MQG44_RS00635 - 114914..115657 (+) 744 WP_005549806.1 type II secretion system protein J -
  MQG44_RS00640 - 115654..116349 (+) 696 WP_005537951.1 DUF2572 family protein -
  MQG44_RS00645 comQ 116324..116626 (+) 303 WP_005554585.1 DUF5374 domain-containing protein Machinery gene

Sequence

Protein


Download         Length: 173 a.a.        Molecular weight: 19865.08 Da        Isoelectric Point: 8.7359

>NTDB_id=665428 MQG44_RS00630 WP_005562086.1 114406..114927(+) (comN) [Aggregatibacter actinomycetemcomitans strain 14R]
MQKGFTLLEMLIALFIISLLLTLALPAWQQHSQQTILQKEQQKLYVFLRQIQARVENSTDIWLLLANRDPVGKRWCLTAQ
IKNSHLCDCLNPVACPQNVFAHFYYPAFAETVLVSKRYYPLEFTRLSGIRNTTSTTCFVLQANQQRTLFSFFNVGSLKLK
GNQSLSACVNDEE

Nucleotide


Download         Length: 522 bp        

>NTDB_id=665428 MQG44_RS00630 WP_005562086.1 114406..114927(+) (comN) [Aggregatibacter actinomycetemcomitans strain 14R]
ATGCAAAAAGGATTCACTTTGCTGGAAATGTTAATTGCATTATTTATTATCAGCCTGTTGCTGACGCTTGCTTTACCGGC
ATGGCAACAGCATTCGCAACAAACTATTCTGCAAAAAGAACAACAAAAACTTTATGTCTTTCTTCGTCAAATTCAGGCGC
GCGTGGAAAATTCTACGGACATCTGGTTGTTATTGGCAAATCGTGATCCTGTAGGAAAGCGCTGGTGTTTGACGGCGCAA
ATTAAAAATAGCCATTTGTGTGACTGTTTAAATCCTGTTGCTTGCCCGCAAAATGTTTTCGCCCATTTTTATTATCCCGC
TTTTGCTGAAACCGTGTTGGTGAGCAAGCGTTATTATCCTTTGGAGTTTACCCGTTTAAGTGGTATTCGGAATACGACTT
CTACCACTTGTTTTGTGCTACAAGCCAATCAGCAGCGTACTTTGTTTTCGTTCTTTAATGTGGGCAGTTTGAAATTAAAA
GGTAATCAATCTTTGAGTGCTTGCGTCAATGATGAAGAATAG

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

59.172

97.688

0.578