Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | MON10_RS12070 | Genome accession | NZ_CP093423 |
| Coordinates | 1961470..1962249 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus paranthracis strain SL1 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1932194..1985784 | 1961470..1962249 | within | 0 |
Gene organization within MGE regions
Location: 1932194..1985784
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MON10_RS11935 (MON10_11935) | recG | 1933685..1935733 (+) | 2049 | WP_001006883.1 | ATP-dependent DNA helicase RecG | - |
| MON10_RS11940 (MON10_11940) | fapR | 1935822..1936415 (+) | 594 | WP_000747352.1 | transcription factor FapR | - |
| MON10_RS11945 (MON10_11945) | plsX | 1936412..1937404 (+) | 993 | WP_000684108.1 | phosphate acyltransferase PlsX | - |
| MON10_RS11950 (MON10_11950) | fabD | 1937419..1938363 (+) | 945 | WP_000516951.1 | ACP S-malonyltransferase | - |
| MON10_RS11955 (MON10_11955) | fabG | 1938363..1939103 (+) | 741 | WP_000911784.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| MON10_RS11960 (MON10_11960) | acpP | 1939173..1939406 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| MON10_RS11965 (MON10_11965) | rncS | 1939465..1940202 (+) | 738 | WP_001146876.1 | ribonuclease III | - |
| MON10_RS11970 (MON10_11970) | smc | 1940350..1943919 (+) | 3570 | WP_000479000.1 | chromosome segregation protein SMC | - |
| MON10_RS11975 (MON10_11975) | ftsY | 1943935..1944924 (+) | 990 | WP_000007646.1 | signal recognition particle-docking protein FtsY | - |
| MON10_RS11980 (MON10_11980) | - | 1945058..1945390 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| MON10_RS11985 (MON10_11985) | ffh | 1945403..1946752 (+) | 1350 | WP_000863461.1 | signal recognition particle protein | - |
| MON10_RS11990 (MON10_11990) | rpsP | 1946853..1947125 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| MON10_RS11995 (MON10_11995) | - | 1947140..1947367 (+) | 228 | WP_000737403.1 | KH domain-containing protein | - |
| MON10_RS12000 (MON10_12000) | rimM | 1947488..1948003 (+) | 516 | WP_000170268.1 | ribosome maturation factor RimM | - |
| MON10_RS12005 (MON10_12005) | trmD | 1948003..1948737 (+) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| MON10_RS12010 (MON10_12010) | rplS | 1948884..1949228 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| MON10_RS12015 (MON10_12015) | lepB | 1949330..1949881 (+) | 552 | WP_000711857.1 | signal peptidase I | - |
| MON10_RS12020 (MON10_12020) | ylqF | 1949902..1950792 (+) | 891 | WP_000236700.1 | ribosome biogenesis GTPase YlqF | - |
| MON10_RS12025 (MON10_12025) | rnhB | 1950844..1951617 (+) | 774 | WP_001174725.1 | ribonuclease HII | - |
| MON10_RS12030 (MON10_12030) | sucC | 1951811..1952971 (+) | 1161 | WP_001020785.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| MON10_RS12035 (MON10_12035) | sucD | 1952991..1953893 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| MON10_RS12040 (MON10_12040) | dprA | 1953981..1954850 (+) | 870 | WP_000818031.1 | DNA-processing protein DprA | - |
| MON10_RS12045 (MON10_12045) | topA | 1954995..1957073 (+) | 2079 | WP_001286973.1 | type I DNA topoisomerase | - |
| MON10_RS12050 (MON10_12050) | trmFO | 1957124..1958428 (+) | 1305 | WP_001998091.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| MON10_RS12055 (MON10_12055) | xerC | 1958494..1959393 (+) | 900 | WP_001101228.1 | tyrosine recombinase XerC | - |
| MON10_RS12060 (MON10_12060) | hslV | 1959436..1959978 (+) | 543 | WP_000526271.1 | ATP-dependent protease proteolytic subunit HslV | - |
| MON10_RS12065 (MON10_12065) | hslU | 1960001..1961392 (+) | 1392 | WP_000550081.1 | ATP-dependent protease ATPase subunit HslU | - |
| MON10_RS12070 (MON10_12070) | codY | 1961470..1962249 (+) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| MON10_RS12075 (MON10_12075) | rpsB | 1962600..1963301 (+) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| MON10_RS12080 (MON10_12080) | tsf | 1963405..1964292 (+) | 888 | WP_001018580.1 | translation elongation factor Ts | - |
| MON10_RS12085 (MON10_12085) | pyrH | 1964359..1965081 (+) | 723 | WP_000042663.1 | UMP kinase | - |
| MON10_RS12090 (MON10_12090) | frr | 1965084..1965641 (+) | 558 | WP_000531500.1 | ribosome recycling factor | - |
| MON10_RS12095 (MON10_12095) | uppS | 1965727..1966503 (+) | 777 | WP_000971301.1 | isoprenyl transferase | - |
| MON10_RS12100 (MON10_12100) | cdsA | 1966521..1967312 (+) | 792 | WP_000813584.1 | phosphatidate cytidylyltransferase | - |
| MON10_RS12105 (MON10_12105) | dxr | 1967336..1968478 (+) | 1143 | WP_000790362.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| MON10_RS12110 (MON10_12110) | rseP | 1968495..1969751 (+) | 1257 | WP_001090248.1 | RIP metalloprotease RseP | - |
| MON10_RS12115 (MON10_12115) | - | 1969861..1971561 (+) | 1701 | WP_000814305.1 | proline--tRNA ligase | - |
| MON10_RS12120 (MON10_12120) | - | 1971686..1975987 (+) | 4302 | WP_000059980.1 | PolC-type DNA polymerase III | - |
| MON10_RS12125 (MON10_12125) | rimP | 1976320..1976790 (+) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| MON10_RS12130 (MON10_12130) | nusA | 1976808..1977914 (+) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| MON10_RS12135 (MON10_12135) | rnpM | 1977926..1978198 (+) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| MON10_RS12140 (MON10_12140) | - | 1978199..1978510 (+) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| MON10_RS12145 (MON10_12145) | infB | 1978515..1980575 (+) | 2061 | WP_000036342.1 | translation initiation factor IF-2 | - |
| MON10_RS12150 (MON10_12150) | - | 1980572..1980853 (+) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| MON10_RS12155 (MON10_12155) | rbfA | 1980869..1981225 (+) | 357 | WP_000776443.1 | 30S ribosome-binding factor RbfA | - |
| MON10_RS12160 (MON10_12160) | truB | 1981312..1982235 (+) | 924 | WP_254232671.1 | tRNA pseudouridine(55) synthase TruB | - |
| MON10_RS12165 (MON10_12165) | ribF | 1982279..1983250 (+) | 972 | WP_000766710.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MON10_RS12170 (MON10_12170) | rpsO | 1983351..1983620 (+) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=664576 MON10_RS12070 WP_000421288.1 1961470..1962249(+) (codY) [Bacillus paranthracis strain SL1]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=664576 MON10_RS12070 WP_000421288.1 1961470..1962249(+) (codY) [Bacillus paranthracis strain SL1]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGCCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAGCGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGCTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATTGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAGTTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTACTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGCCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAGCGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGCTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATTGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAGTTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTACTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |