Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   OG254_RS13935 Genome accession   NZ_CP108659
Coordinates   3113227..3114303 (+) Length   358 a.a.
NCBI ID   WP_405581279.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01092     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3108227..3119303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG254_RS13910 (OG254_13865) - 3108867..3110084 (-) 1218 WP_405581276.1 sensor histidine kinase -
  OG254_RS13915 (OG254_13870) - 3110309..3110587 (-) 279 WP_147997985.1 PspA-associated protein PspAA -
  OG254_RS13920 (OG254_13875) - 3110630..3111397 (-) 768 WP_261989451.1 PspA/IM30 family protein -
  OG254_RS13925 (OG254_13880) - 3111695..3112339 (+) 645 WP_147996435.1 DUF3043 domain-containing protein -
  OG254_RS13930 (OG254_13885) - 3112420..3113163 (+) 744 WP_405594980.1 class I SAM-dependent methyltransferase -
  OG254_RS13935 (OG254_13890) htrA 3113227..3114303 (+) 1077 WP_405581279.1 S1C family serine protease Regulator
  OG254_RS13940 (OG254_13895) - 3114353..3114562 (-) 210 WP_147996433.1 hypothetical protein -
  OG254_RS13945 (OG254_13900) - 3114734..3115936 (+) 1203 WP_405581283.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  OG254_RS13950 (OG254_13905) - 3116002..3116826 (-) 825 WP_405581286.1 class I SAM-dependent methyltransferase -
  OG254_RS13955 (OG254_13910) cobT 3117042..3118175 (+) 1134 WP_405581289.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -
  OG254_RS13960 (OG254_13915) - 3118277..3118981 (+) 705 WP_405581292.1 hypothetical protein -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 36755.94 Da        Isoelectric Point: 4.2314

>NTDB_id=664576 OG254_RS13935 WP_405581279.1 3113227..3114303(+) (htrA) [Streptomyces sp. NBC_01092]
MDARRLRTRRPAVVVLALLFLLGLLGACSSSSSTREEEDSTTQAAVPKAVRAVDDLQDGYLKVIKDVLPSVVQIQGRRDL
GSGVVYDGDGHIVTNAHVVGDEKSFRVTTANSEKELTAQLVSSYPQQDLAVVKLDDPPDGLKGAKFADSSKIQVGQIVLA
MGSPLGLSSSVTQGIVSATGRTVTEGGEGGTGATIANMVQTSADINPGNSGGALVNLDSEVIGVPTLAAVDPDVGDSAAP
GIGFAIPSSTVQKIADQIIEDGRVTDSGRAALGITGRTVVDDDYQAAGVAVVEVQDGSAADKAGLEPGDIITRLGDTEIT
TITSLSEALAGDKPGDRTTVTYSRDGDDKKVDVTLGEQ

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=664576 OG254_RS13935 WP_405581279.1 3113227..3114303(+) (htrA) [Streptomyces sp. NBC_01092]
ATGGATGCTCGCCGTTTGCGTACCCGGCGTCCGGCCGTCGTGGTCCTCGCCCTCCTGTTCTTGCTCGGCCTCCTCGGCGC
CTGTTCGTCCTCCTCGTCCACGCGCGAGGAGGAGGACTCGACGACCCAGGCCGCCGTGCCGAAGGCGGTCCGGGCGGTCG
ATGACCTTCAGGACGGCTATCTGAAGGTGATCAAGGACGTGTTGCCGTCGGTCGTGCAGATCCAGGGCAGGCGTGACCTC
GGATCGGGCGTGGTCTACGACGGGGACGGGCACATCGTCACCAACGCGCATGTCGTCGGGGACGAGAAGAGCTTCCGCGT
GACGACCGCCAACAGCGAGAAGGAACTCACCGCCCAGCTCGTCTCCTCGTACCCGCAGCAGGACCTCGCCGTCGTCAAGC
TGGACGACCCGCCGGACGGGCTGAAGGGGGCGAAGTTCGCGGACTCCTCGAAGATCCAGGTCGGGCAGATCGTGCTGGCC
ATGGGCTCGCCGCTGGGGCTGTCGTCCAGTGTGACGCAGGGCATCGTCTCGGCGACCGGACGGACCGTCACCGAGGGCGG
CGAGGGCGGCACGGGCGCGACGATCGCGAACATGGTGCAGACGTCGGCGGACATCAACCCCGGCAACAGCGGCGGCGCCC
TGGTGAACCTCGACAGCGAGGTCATCGGCGTCCCGACCCTCGCCGCCGTCGACCCGGACGTCGGGGACAGCGCGGCGCCG
GGCATCGGGTTCGCGATCCCGTCGTCGACGGTGCAGAAGATCGCCGACCAGATCATCGAGGACGGCCGGGTCACCGACTC
GGGCCGGGCGGCGCTCGGCATCACCGGCCGCACGGTCGTGGACGACGACTACCAGGCGGCTGGCGTGGCCGTCGTCGAGG
TGCAGGACGGCTCAGCGGCCGACAAGGCCGGTCTGGAGCCCGGGGACATCATCACCCGGCTGGGGGATACGGAGATCACC
ACCATCACCTCGCTGTCCGAGGCGCTGGCCGGCGACAAGCCGGGTGACCGGACCACCGTGACGTACAGCCGTGACGGCGA
CGACAAGAAGGTGGATGTCACGTTGGGCGAGCAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

33.588

100

0.369