Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   MNO09_RS07755 Genome accession   NZ_CP093325
Coordinates   1036548..1038887 (+) Length   779 a.a.
NCBI ID   WP_000941274.1    Uniprot ID   A0AB37YXX1
Organism   Bacillus sp. N5-665     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1031548..1043887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNO09_RS07740 (MNO09_07665) - 1032577..1032861 (+) 285 WP_000890214.1 post-transcriptional regulator -
  MNO09_RS07745 (MNO09_07670) secDF 1033132..1035396 (+) 2265 WP_001119085.1 protein translocase subunit SecDF -
  MNO09_RS07750 (MNO09_07675) - 1035553..1036446 (+) 894 WP_000409734.1 cation diffusion facilitator family transporter -
  MNO09_RS07755 (MNO09_07680) recJ 1036548..1038887 (+) 2340 WP_000941274.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  MNO09_RS07760 (MNO09_07685) - 1038935..1039447 (+) 513 WP_000346221.1 adenine phosphoribosyltransferase -
  MNO09_RS07765 (MNO09_07690) relA 1039658..1041841 (+) 2184 WP_001262801.1 GTP diphosphokinase -
  MNO09_RS07770 (MNO09_07695) - 1041859..1042299 (+) 441 WP_001266952.1 D-tyrosyl-tRNA(Tyr) deacylase -
  MNO09_RS07775 (MNO09_07700) - 1042568..1042744 (+) 177 WP_001242605.1 hypothetical protein -

Sequence

Protein


Download         Length: 779 a.a.        Molecular weight: 88262.84 Da        Isoelectric Point: 4.9026

>NTDB_id=663599 MNO09_RS07755 WP_000941274.1 1036548..1038887(+) (recJ) [Bacillus sp. N5-665]
MLQPKTRWKEKEYNNERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAIQNG
EQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKEL
GIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSLAPRINAVGRLEDATPAVHLLLSDDPEEAKELAEEIDELNKL
RKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEDWNPGVIGIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLF
ANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDVFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQ
DIAVEAWQLFDWRSMRNVEANVAELPKEKITMVYFSEEVLNKFSLEDYKEHMMHASEVTHLDDQYIVLLDLPKGTEELRD
LFKVGFPSRIYTLFYQENNHLFSTVPTREHFKWYYSFLSQKAPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG

Nucleotide


Download         Length: 2340 bp        

>NTDB_id=663599 MNO09_RS07755 WP_000941274.1 1036548..1038887(+) (recJ) [Bacillus sp. N5-665]
GTGTTACAACCGAAGACGCGTTGGAAAGAAAAAGAATATAATAATGAGCGAGTGAGTGAATTAGCAAGTAAATTACAATT
ATCACCACTTGTCGTTTCGTTATTCCTCGGTAGAGGACTAGATACAGAAGATAAGATTTTAGATTTTTTAAATACAGAAA
ATCAAGAATTTCATGATCCATTTTTATTAGAAGGAATGGATAGAACGGTAGAACGTGTAAATAAGGCGATTCAAAATGGA
GAGCAAATATTAATATTTGGTGACTACGATGCGGATGGAGTAAGTAGTACGACTGTGTTATATCTTGCCTTGCAAGAATT
AGGTGCAGACGTAGAATTTTATATTCCAAACCGTTTTACAGAAGGATATGGACCAAACGAAGAAGCATTTCGTTGGGCAC
ATAGCGCAGGATTCTCACTAATTATTACTGTCGATACTGGTATCGCAGCAGTACATGAAGCGAAGGTAGCGAAGGAGCTT
GGGATAGATCTTATTATTACAGATCACCATGAGCCACCACCAGAATTGCCAGAAGCACTTGCGATTATTCATCCGAAATT
AGATGGCGGTGTATATCCGTTTCACTATTTAGCTGGTGTAGGTGTTGCGTTTAAAGTTGCACATGCACTACTAGGCCGTG
TACCAGAACATTTATTAGAAATTGCAGTAATTGGTACAGTAGCCGATTTAGTATCACTTCATGGTGAGAATAGATTACTA
GTGAAGCGCGGTTTAAAGCATATGCGCATGACGAAAAATATCGGACTAAAGGCGCTATTTAAAGTTGCTAACGTTTCGCA
AAGTGAAATTACAGAAGAGAGTATTGGCTTCTCACTCGCTCCGCGTATTAATGCAGTTGGACGTTTAGAAGATGCTACAC
CGGCTGTACATCTTTTATTATCAGATGATCCAGAAGAAGCGAAAGAGTTGGCTGAAGAAATTGATGAGCTGAACAAACTG
CGAAAAGATATTGTAAAGCAAATTACAGAAGAAGCTATCGCTGAAGTGGAAAATAATTTCCCGCCAGAAGACAATAAAGT
ACTAGTACTGGCAAAAGAAGACTGGAATCCAGGTGTAATTGGAATTGTCGCATCTAAATTAGTTGAACGTTTTTATCGTC
CAACGATTGTATTATGCATTGATCCTGTAAAAGAAACAGCAAAAGGTTCAGCACGTAGTATTGCAGGATTTGATTTGTTT
GCAAATTTGTCAGATTGTAGAGAGTTATTGCCACACTTCGGAGGGCATCCGATGGCAGCGGGAATGACGCTACATATGAA
TGATGTAGATGAATTACGCCGCCGCTTAAATGAACAAGCAGAGGTAATTTTAACAGAAGAAGATTTTATTCCAATTACAG
CTGTTGATGTCTTTTGTAAAGTGGAGGATGTAACACTGGCAGCAATTGAAGACATGCAAAAGTTAGCGCCATTTGGTGTT
GGAAATCCAAAACCACGTATTGCAGTGAAGGATGCAGAGCTAGAAAGTATTCGTGCAATCGGATCAGATGGCTCTCATTT
GAAAATGGCTCTTCGCGATGGACAAGCGACACTGGATACAATCGGATTTGGTTTTGGTGCGTATGCAAAAGAAATTTCTC
CAGTTGCAAAGGTATCTGTAATAGGGGAAGCATCTATCAATGAATGGAATAATTTTAAGAAGCCGCAATTAATGGTACAA
GATATTGCTGTAGAGGCGTGGCAATTATTTGATTGGCGTAGTATGCGTAACGTAGAAGCGAATGTAGCAGAACTTCCGAA
AGAAAAAATAACGATGGTGTATTTTTCTGAAGAGGTATTGAATAAGTTTTCTCTAGAAGACTATAAAGAGCATATGATGC
ATGCATCAGAAGTAACTCATTTAGACGATCAATACATCGTGTTACTTGATTTGCCAAAAGGAACAGAGGAATTACGAGAT
TTATTTAAAGTGGGGTTCCCGTCGCGAATTTATACGCTATTTTATCAAGAGAATAATCATTTATTTAGTACTGTTCCAAC
GAGGGAACATTTTAAATGGTACTATTCGTTCTTGAGCCAAAAAGCACCATTTTCTTTAAGACAATATGGAGAACAACTAT
GTCGACATAAAGGTTGGTCAAAAGATACAGTAAATTTCATGACACAGGTGTTTTTTGAGTTAGAATTTGTTACAATAAAA
GATGGCGTCATTTTTATGGCAGACAAAAAACAAAAGCGTGATTTAATTGAATCGAACACATATCGTGAGAAAATGAACCA
CTTACAATTAGAAAAAGAATTGGTTTATAGCACATATCAGCAACTATATACATGGTTTGAAACGATTCGTAATCATAAAG
AAGTAGAACAGTTAGGGTAA

Domains

Predicted by InterproScan.

RecJ OB domain (RecJ_OB)

(455-561)

Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C)

(568-766)

DHH family (DHH)

(82-226)

DHHA1 domain (DHHA1)

(315-439)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

52.713

99.358

0.524