Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | MNU53_RS06165 | Genome accession | NZ_CP093185 |
| Coordinates | 1296559..1297626 (+) | Length | 355 a.a. |
| NCBI ID | WP_001831131.1 | Uniprot ID | A0A9Q5JLH5 |
| Organism | Staphylococcus epidermidis strain TMDU-300 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1291559..1302626
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNU53_RS06135 (MNU53_06130) | - | 1291977..1293437 (+) | 1461 | WP_001832757.1 | rhomboid family intramembrane serine protease | - |
| MNU53_RS06140 (MNU53_06135) | - | 1293421..1293621 (+) | 201 | WP_001831138.1 | YqgQ family protein | - |
| MNU53_RS06145 (MNU53_06140) | - | 1293621..1294607 (+) | 987 | WP_001831113.1 | ROK family glucokinase | - |
| MNU53_RS06150 (MNU53_06145) | - | 1294607..1294933 (+) | 327 | WP_001831234.1 | MTH1187 family thiamine-binding protein | - |
| MNU53_RS06155 (MNU53_06150) | - | 1294933..1295556 (+) | 624 | WP_001831016.1 | MBL fold metallo-hydrolase | - |
| MNU53_RS06160 (MNU53_06155) | comGA | 1295613..1296587 (+) | 975 | WP_001831109.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MNU53_RS06165 (MNU53_06160) | comGB | 1296559..1297626 (+) | 1068 | WP_001831131.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MNU53_RS06170 (MNU53_06165) | comGC | 1297644..1297961 (+) | 318 | WP_001831271.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MNU53_RS06175 (MNU53_06170) | comGD | 1297951..1298388 (+) | 438 | WP_001831025.1 | competence type IV pilus minor pilin ComGD | - |
| MNU53_RS06180 (MNU53_06175) | - | 1298375..1298668 (+) | 294 | WP_001831116.1 | hypothetical protein | - |
| MNU53_RS06185 (MNU53_06180) | - | 1298592..1299083 (+) | 492 | WP_002440043.1 | competence type IV pilus minor pilin ComGF | - |
| MNU53_RS06190 (MNU53_06185) | - | 1299248..1299760 (+) | 513 | WP_002440040.1 | shikimate kinase | - |
| MNU53_RS06195 (MNU53_06190) | gcvT | 1299978..1301069 (+) | 1092 | WP_002487670.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MNU53_RS06200 (MNU53_06195) | gcvPA | 1301089..1302435 (+) | 1347 | WP_002456181.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 42379.68 Da Isoelectric Point: 10.1702
>NTDB_id=662255 MNU53_RS06165 WP_001831131.1 1296559..1297626(+) (comGB) [Staphylococcus epidermidis strain TMDU-300]
MKKLSINTFKYKRNKYLTEIQSIDLLQRLQQLLSHGFTLYQSFKFLNSYFKYKERTINKKIIQHLQNGATCYDILKIIGY
PELVLLQIKFAENYGNIEEALVDTVQYMKRNLKAKKRLIKTLQYPVALISIFLFILTILNITVIPQFQQLYETMNVKLST
FQNLLTLIITRLPKLTFIFIFISGIAFFITYKFYYYLPIEKKLKSILKIPMINTYYKIYRTYQLSNQLSLFYRNGTSLQQ
IVRIYRNEQDNDFLKFLGDYLFKEANKGLPLPVILMNLKCFQNDLIKFIEQGEKNGKLDIELKLYSQMLLQQFEEKVLKQ
TKFIQPIIFFILGIFIVSLYLVIMLPMFELMQTIK
MKKLSINTFKYKRNKYLTEIQSIDLLQRLQQLLSHGFTLYQSFKFLNSYFKYKERTINKKIIQHLQNGATCYDILKIIGY
PELVLLQIKFAENYGNIEEALVDTVQYMKRNLKAKKRLIKTLQYPVALISIFLFILTILNITVIPQFQQLYETMNVKLST
FQNLLTLIITRLPKLTFIFIFISGIAFFITYKFYYYLPIEKKLKSILKIPMINTYYKIYRTYQLSNQLSLFYRNGTSLQQ
IVRIYRNEQDNDFLKFLGDYLFKEANKGLPLPVILMNLKCFQNDLIKFIEQGEKNGKLDIELKLYSQMLLQQFEEKVLKQ
TKFIQPIIFFILGIFIVSLYLVIMLPMFELMQTIK
Nucleotide
Download Length: 1068 bp
>NTDB_id=662255 MNU53_RS06165 WP_001831131.1 1296559..1297626(+) (comGB) [Staphylococcus epidermidis strain TMDU-300]
GTGAAGAAGTTGTCGATAAATACATTTAAATATAAGAGGAATAAATATCTTACTGAAATACAATCAATAGACTTACTACA
GAGATTACAACAGCTTTTAAGTCACGGATTCACTTTATATCAAAGTTTTAAATTTTTAAACTCCTATTTTAAATATAAAG
AGCGAACAATAAATAAAAAGATTATCCAACATCTACAAAACGGTGCTACATGTTATGATATTTTAAAAATAATAGGGTAT
CCAGAATTAGTTCTTCTTCAAATAAAATTTGCTGAAAACTACGGCAACATTGAGGAGGCTCTCGTTGATACTGTTCAATA
TATGAAAAGAAATCTGAAAGCTAAAAAACGACTCATCAAAACCTTACAATATCCTGTTGCATTAATTTCTATCTTCTTAT
TCATATTAACCATTTTAAATATAACTGTCATACCTCAATTTCAACAACTTTATGAGACTATGAATGTTAAATTATCAACA
TTTCAAAATCTACTAACTCTTATTATTACCCGTCTTCCCAAACTAACTTTCATTTTTATCTTTATTAGTGGTATAGCATT
TTTTATCACTTATAAATTCTACTATTATCTACCAATTGAGAAAAAGTTAAAATCTATTTTAAAAATCCCAATGATTAATA
CGTATTATAAAATATATAGAACTTATCAACTTTCCAATCAACTTTCTTTATTTTACAGAAATGGTACAAGTCTTCAACAA
ATTGTCCGTATATATCGTAATGAGCAAGATAACGATTTTCTTAAATTTCTGGGTGATTATCTTTTTAAAGAAGCTAATAA
AGGGCTCCCGTTACCTGTTATATTAATGAATTTAAAATGTTTTCAAAATGATTTGATTAAATTCATAGAACAAGGAGAGA
AAAATGGGAAATTAGATATAGAATTAAAGTTATACAGTCAAATGCTATTACAGCAATTTGAAGAAAAAGTGTTAAAACAA
ACAAAATTTATACAACCTATCATCTTCTTTATCTTGGGAATTTTTATTGTATCTTTATACTTAGTCATTATGCTTCCTAT
GTTTGAACTTATGCAAACAATAAAATAA
GTGAAGAAGTTGTCGATAAATACATTTAAATATAAGAGGAATAAATATCTTACTGAAATACAATCAATAGACTTACTACA
GAGATTACAACAGCTTTTAAGTCACGGATTCACTTTATATCAAAGTTTTAAATTTTTAAACTCCTATTTTAAATATAAAG
AGCGAACAATAAATAAAAAGATTATCCAACATCTACAAAACGGTGCTACATGTTATGATATTTTAAAAATAATAGGGTAT
CCAGAATTAGTTCTTCTTCAAATAAAATTTGCTGAAAACTACGGCAACATTGAGGAGGCTCTCGTTGATACTGTTCAATA
TATGAAAAGAAATCTGAAAGCTAAAAAACGACTCATCAAAACCTTACAATATCCTGTTGCATTAATTTCTATCTTCTTAT
TCATATTAACCATTTTAAATATAACTGTCATACCTCAATTTCAACAACTTTATGAGACTATGAATGTTAAATTATCAACA
TTTCAAAATCTACTAACTCTTATTATTACCCGTCTTCCCAAACTAACTTTCATTTTTATCTTTATTAGTGGTATAGCATT
TTTTATCACTTATAAATTCTACTATTATCTACCAATTGAGAAAAAGTTAAAATCTATTTTAAAAATCCCAATGATTAATA
CGTATTATAAAATATATAGAACTTATCAACTTTCCAATCAACTTTCTTTATTTTACAGAAATGGTACAAGTCTTCAACAA
ATTGTCCGTATATATCGTAATGAGCAAGATAACGATTTTCTTAAATTTCTGGGTGATTATCTTTTTAAAGAAGCTAATAA
AGGGCTCCCGTTACCTGTTATATTAATGAATTTAAAATGTTTTCAAAATGATTTGATTAAATTCATAGAACAAGGAGAGA
AAAATGGGAAATTAGATATAGAATTAAAGTTATACAGTCAAATGCTATTACAGCAATTTGAAGAAAAAGTGTTAAAACAA
ACAAAATTTATACAACCTATCATCTTCTTTATCTTGGGAATTTTTATTGTATCTTTATACTTAGTCATTATGCTTCCTAT
GTTTGAACTTATGCAAACAATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
49.719 |
100 |
0.499 |
| comGB | Staphylococcus aureus N315 |
49.719 |
100 |
0.499 |