Detailed information NTG0661954

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MMZ59_RS12245
• Genome accession: NZ_CP093150
• Coordinates: 2400281..2402665 (-)
• Length: 794 a.a.
• NCBI ID: WP_241511321.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain JYY-02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2395281..2407665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MMZ59_RS12210 (MMZ59_12210)	-	2396188..2396916 (+)	729	WP_241511318.1	amino acid ABC transporter ATP-binding protein	-
MMZ59_RS12215 (MMZ59_12215)	-	2396931..2397740 (+)	810	WP_138826156.1	transporter substrate-binding domain-containing protein	-
MMZ59_RS12220 (MMZ59_12220)	-	2397821..2398474 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
MMZ59_RS12225 (MMZ59_12225)	-	2398490..2399140 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
MMZ59_RS12230 (MMZ59_12230)	-	2399179..2399310 (-)	132	WP_008342695.1	YrzQ family protein	-
MMZ59_RS12235 (MMZ59_12235)	-	2399331..2399522 (-)	192	WP_003216308.1	hypothetical protein	-
MMZ59_RS12240 (MMZ59_12240)	-	2399536..2399994 (-)	459	WP_241511320.1	PRC-barrel domain-containing protein	-
MMZ59_RS12245 (MMZ59_12245)	recD2	2400281..2402665 (-)	2385	WP_241511321.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MMZ59_RS12250 (MMZ59_12250)	-	2402685..2403338 (-)	654	WP_008342707.1	tetratricopeptide repeat protein	-
MMZ59_RS12255 (MMZ59_12255)	mnmA	2403400..2404518 (-)	1119	WP_241511323.1	tRNA 2-thiouridine(34) synthase MnmA	-
MMZ59_RS12260 (MMZ59_12260)	-	2404614..2405756 (-)	1143	WP_025207703.1	cysteine desulfurase family protein	-
MMZ59_RS12265 (MMZ59_12265)	cymR	2405775..2406194 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88960.34 Da
• Isoelectric Point: 5.0580

>NTDB_id=661954 MMZ59_RS12245 WP_241511321.1 2400281..2402665(-) (recD2) [Bacillus altitudinis strain JYY-02]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYNVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIIETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=661954 MMZ59_RS12245 WP_241511321.1 2400281..2402665(-) (recD2) [Bacillus altitudinis strain JYY-02]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCTGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTGCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGTGAG
CAGTTTCAAGCCACCCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATAACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGTATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAATCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGAACGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCATCGAAACCCGTAAATTGCTGAATCAAACAGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
ATCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGTATTCAAAAAATTGTCTCTCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTCTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGTTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTTA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGGCCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACATTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGGTATTCAGCAAAGGACATTCAAGTGCTCGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.377	100	0.805