Detailed information NTG0660948

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ML603_RS08760
• Genome accession: NZ_CP092887
• Coordinates: 1765014..1765946 (-)
• Length: 310 a.a.
• NCBI ID: WP_115245665.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain Karl
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1760014..1770946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ML603_RS08735 (ML603_08735)	tsaD	1760502..1761518 (-)	1017	WP_241067148.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
ML603_RS08740 (ML603_08740)	rimI	1761508..1761933 (-)	426	WP_218654831.1	ribosomal protein S18-alanine N-acetyltransferase	-
ML603_RS08745 (ML603_08745)	tsaB	1761935..1762633 (-)	699	WP_241067150.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
ML603_RS08750 (ML603_08750)	-	1762919..1763149 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
ML603_RS08755 (ML603_08755)	rnjA	1763151..1764833 (+)	1683	WP_003056700.1	ribonuclease J1	-
ML603_RS08760 (ML603_08760)	amiF	1765014..1765946 (-)	933	WP_115245665.1	ATP-binding cassette domain-containing protein	Regulator
ML603_RS08765 (ML603_08765)	oppD	1765939..1766991 (-)	1053	WP_154413653.1	ABC transporter ATP-binding protein	Regulator
ML603_RS08770 (ML603_08770)	-	1767003..1768034 (-)	1032	WP_241067151.1	ABC transporter permease	-
ML603_RS08775 (ML603_08775)	-	1768044..1768958 (-)	915	WP_003052794.1	ABC transporter permease	-
ML603_RS08780 (ML603_08780)	-	1769226..1770881 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35222.07 Da
• Isoelectric Point: 6.7324

>NTDB_id=660948 ML603_RS08760 WP_115245665.1 1765014..1765946(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYR

Nucleotide

• Length: 933 bp

>NTDB_id=660948 ML603_RS08760 WP_115245665.1 1765014..1765946(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCTGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGAGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGACCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTAACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAATAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTGAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTTGATGTGTC
GATTCAGGCCCAGGTGGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAGCCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTGTATGATCCAAGTCAAGAATTAGACGGCCAAGAACGTCAGATGCATGAGATTACTCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCGTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526