Detailed information NTG0066088

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: M3B_RS01320
• Genome accession: NZ_AP014596
• Coordinates: 248161..249084 (+)
• Length: 307 a.a.
• NCBI ID: WP_002986000.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain M3-b
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 243161..254084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M3B_RS01305 (M3B_0267)	amiC	244661..246163 (+)	1503	WP_011054186.1	ABC transporter permease	Regulator
M3B_RS01310 (M3B_0268)	amiD	246163..247089 (+)	927	WP_011054187.1	oligopeptide ABC transporter permease OppC	Regulator
M3B_RS01315 (M3B_0269)	amiE	247098..248168 (+)	1071	WP_002992231.1	ABC transporter ATP-binding protein	Regulator
M3B_RS01320 (M3B_0270)	amiF	248161..249084 (+)	924	WP_002986000.1	ABC transporter ATP-binding protein	Regulator
M3B_RS10410	-	249122..249211 (-)	90	WP_109821088.1	IS3 family transposase	-
M3B_RS10105 (M3B_0271)	-	249232..249477 (-)	246	WP_030126956.1	hypothetical protein	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34715.90 Da
• Isoelectric Point: 6.5113

>NTDB_id=66088 M3B_RS01320 WP_002986000.1 248161..249084(+) (amiF) [Streptococcus pyogenes strain M3-b]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=66088 M3B_RS01320 WP_002986000.1 248161..249084(+) (amiF) [Streptococcus pyogenes strain M3-b]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGCTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAGTCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818