Detailed information NTG0660604

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MK860_RS12720
• Genome accession: NZ_CP092829
• Coordinates: 2492754..2495138 (-)
• Length: 794 a.a.
• NCBI ID: WP_065098513.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain MS32
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2487754..2500138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK860_RS12685 (MK860_12625)	-	2488810..2489538 (+)	729	WP_044139592.1	amino acid ABC transporter ATP-binding protein	-
MK860_RS12690 (MK860_12630)	-	2489552..2490361 (+)	810	WP_065098510.1	transporter substrate-binding domain-containing protein	-
MK860_RS12695 (MK860_12635)	-	2490442..2491095 (+)	654	WP_126740754.1	amino acid ABC transporter permease	-
MK860_RS12700 (MK860_12640)	-	2491111..2491761 (+)	651	WP_065098512.1	amino acid ABC transporter permease	-
MK860_RS12705 (MK860_12645)	-	2491804..2491935 (-)	132	WP_003216198.1	YrzQ family protein	-
MK860_RS12710 (MK860_12650)	-	2491956..2492147 (-)	192	WP_003216308.1	hypothetical protein	-
MK860_RS12715 (MK860_12655)	-	2492161..2492619 (-)	459	WP_065098677.1	prc-barrel domain-containing protein	-
MK860_RS12720 (MK860_12660)	recD2	2492754..2495138 (-)	2385	WP_065098513.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MK860_RS12725 (MK860_12665)	-	2495158..2495811 (-)	654	WP_185107042.1	tetratricopeptide repeat protein	-
MK860_RS12730 (MK860_12670)	mnmA	2495872..2496990 (-)	1119	WP_265208128.1	tRNA 2-thiouridine(34) synthase MnmA	-
MK860_RS12735 (MK860_12675)	-	2497086..2498228 (-)	1143	WP_113767482.1	cysteine desulfurase family protein	-
MK860_RS12740 (MK860_12680)	-	2498247..2498666 (-)	420	WP_044139599.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89033.57 Da
• Isoelectric Point: 5.2097

>NTDB_id=660604 MK860_RS12720 WP_065098513.1 2492754..2495138(-) (recD2) [Bacillus pumilus strain MS32]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGTQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSVDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=660604 MK860_RS12720 WP_065098513.1 2492754..2495138(-) (recD2) [Bacillus pumilus strain MS32]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAAGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
CGAAGGGATAGGGAAAAAGACGGCGGAAGAAATTGTAGGGCAGCTTGGCACCCAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
CTGGAACAAATCATGATCAGCCTGAATCAATACGGCTTTGGTCCGCAGCTCAGCATGAAGATTTATCAAGTGTACGAGAG
TGAGACGCTGCAGAAGATTGAAGAAAACCCGTATCAGCTCGTCAAGGATGTCGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGCCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCCAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTCCCTGAATCAGAATTTCTGCTAGCTCTTGGTGAGCTCGAGGAACGGCTGGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCGCTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGGGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAACGGGTCAGAGGGATTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCTGTGCC
AGCTGTTACCCTGACAGATATTTACCGTCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGTTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCTATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCATTTG
GTGATGTCGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAACAATATTTTTAACGGTGATATT
GGCGAGATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGTTCGATCCACAAATCACAAGGCAGTGAAT
TCCCCATTGTTGTGCTTCCAGTCGTGAGAAGCTACTATAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGGTTATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.276	100	0.805