Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG349_RS09155 Genome accession   NZ_CP108393
Coordinates   2205082..2205867 (+) Length   261 a.a.
NCBI ID   WP_161309411.1    Uniprot ID   A0A6G9GW45
Organism   Streptomyces sp. NBC_01317     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2200082..2210867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - dinR/lexA 2205082..2205867 (+) 786 - - Regulator

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28351.07 Da        Isoelectric Point: 7.4239

>NTDB_id=660060 OG349_RS09155 WP_161309411.1 2205082..2205867(+) (dinR/lexA) [Streptomyces sp. NBC_01317]
MTTTADSATITAQDRSQSRLEPVHAMNDAVTNPEGPKPNRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQQTDTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPHNAAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=660060 OG349_RS09155 WP_161309411.1 2205082..2205867(+) (dinR/lexA) [Streptomyces sp. NBC_01317]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCAATGAA
TGACGCAGTCACGAACCCGGAGGGGCCCAAGCCCAACCGGTCACTGCCCGGCAGGCCTCCAGGAATCAGGGCGGACAGCT
CCGGTCTCACGGACCGGCAGCGGCGGGTCATCGAGGTCATCAGGGACTCGGTCCAACGGCGTGGGTACCCCCCGTCGATG
CGGGAGATCGGCCAGGCCGTCGGTCTCTCCAGCACGTCGTCGGTGGCCCATCAGCTGATGGCACTGGAGCGGAAAGGGTT
CCTCCGCAGGGATCCGCACCGCCCGCGGGCGTACGAGGTCAGGGGCTCCGACCAGCCGAGCACCCAGCAGACCGACACGA
CCGGCAAGCCCGCCGCGTCGTACGTCCCGCTGGTCGGCCGGATCGCGGCCGGCGGACCGATCCTCGCCGAGGAGTCCGTC
GAGGACGTCTTCCCGCTCCCCCGTCAGTTGGTGGGGGACGGCGAGCTGTTCGTGCTGAAGGTTGTCGGTGACTCGATGAT
CGAGGCCGCGATCTGTGACGGCGACTGGGTGACGGTACGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCCGCGA
TGCTCGACGGCGAGGCCACCGTCAAGCGCTTCCGGCGCGAGGACGGGCATGTGTGGCTGCTCCCGCACAACGCGGCGTAC
CAGCCGATCCCCGGCGACGAGGCGACGATCCTCGGCAAGGTGGTCGCGGTCCTGCGCCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(143-255)

LexA DNA binding domain (LexA_DNA_bind)

(54-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G9GW45

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

81.226

0.375