Detailed information NTG0658791

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OHA58_RS39540
• Genome accession: NZ_CP108312
• Coordinates: 8676610..8677638 (+)
• Length: 342 a.a.
• NCBI ID: WP_405475414.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00009
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 8671610..8682638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA58_RS39515 (OHA58_39560)	-	8673398..8673576 (+)	179	Protein_7812	FAD-dependent oxidoreductase	-
OHA58_RS39520	-	8673637..8674368 (-)	732	WP_405485399.1	SsgA family sporulation/cell division regulator	-
OHA58_RS39525 (OHA58_39565)	-	8674571..8675260 (-)	690	WP_405475417.1	glycoside hydrolase family 11 protein	-
OHA58_RS39530 (OHA58_39570)	-	8675535..8676096 (-)	562	Protein_7815	fibronectin type III-like domain-contianing protein	-
OHA58_RS39535 (OHA58_39575)	-	8676078..8676479 (-)	402	Protein_7816	extracellular solute-binding protein	-
OHA58_RS39540 (OHA58_39580)	cytR	8676610..8677638 (+)	1029	WP_405475414.1	LacI family DNA-binding transcriptional regulator	Regulator
OHA58_RS39545 (OHA58_39585)	-	8677870..8678381 (-)	512	Protein_7818	ABC transporter substrate-binding protein	-
OHA58_RS39550 (OHA58_39590)	-	8678370..8678985 (+)	616	Protein_7819	sensor histidine kinase	-
OHA58_RS39555 (OHA58_39595)	-	8678986..8680719 (-)	1734	WP_405475412.1	amylo-alpha-1,6-glucosidase	-
OHA58_RS39560 (OHA58_39600)	-	8680784..8681545 (-)	762	WP_405484667.1	carbohydrate ABC transporter permease	-
OHA58_RS39565 (OHA58_39605)	-	8681614..8682597 (-)	984	WP_405475410.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37288.69 Da
• Isoelectric Point: 6.4210

>NTDB_id=658791 OHA58_RS39540 WP_405475414.1 8676610..8677638(+) (cytR) [Streptomyces sp. NBC_00009]
MLQGMRDDEDLGRITLAEVAQKAGVSISTVSKVLNGRQDVAAPTRVKVERLLETHSYRRTTRAAREAPLIELVFHELDSI
WAMELIRGVENVAKAHRASVVLTESGTRHAPAPDWIEGVMQRRPRGVVLVFSALPAEVKQRLQSRSIPFVIVDPAGDPDP
DVPSVGSANWTGGRVATRHLVELGHRRIGIITGPDDMLCSHARLDGYRSALGMAGIEADPALVRYGDFHVEGGFERALEL
LDLPEPPTAIFAGSDLQALGVLEAARVRGLRVPQDLSVVGYDDVPVARWSSPALTTVHQPLREMAEEAVQMIMRLRDQEP
VTTRLELATSLVVRKSTAAPAS

Nucleotide

• Length: 1029 bp

>NTDB_id=658791 OHA58_RS39540 WP_405475414.1 8676610..8677638(+) (cytR) [Streptomyces sp. NBC_00009]
ATGCTCCAAGGCATGCGTGATGACGAGGACTTGGGCCGCATCACCCTCGCCGAGGTGGCCCAAAAGGCAGGCGTCTCCAT
TTCGACAGTTTCGAAGGTGCTCAACGGGCGGCAGGATGTGGCCGCCCCGACCCGGGTCAAGGTGGAGCGCCTTCTGGAGA
CGCACTCCTACCGGCGCACGACGCGGGCCGCCCGCGAGGCGCCCCTCATCGAGTTGGTCTTCCACGAGCTGGACAGCATC
TGGGCGATGGAGCTGATCCGTGGCGTGGAGAACGTCGCCAAGGCGCACCGGGCAAGCGTCGTGCTGACCGAGAGCGGCAC
CCGCCACGCACCCGCCCCCGACTGGATCGAAGGCGTCATGCAGCGCAGGCCGCGCGGCGTGGTGCTCGTCTTCTCTGCGC
TGCCCGCCGAGGTCAAGCAGCGGCTGCAGTCGCGCTCCATCCCGTTCGTCATCGTCGACCCGGCCGGCGACCCCGACCCG
GACGTACCCTCGGTCGGCTCGGCGAACTGGACCGGGGGGCGGGTCGCCACCCGGCACCTGGTGGAACTCGGCCATCGCCG
CATCGGGATCATCACGGGGCCAGACGACATGCTCTGCTCCCACGCCCGCCTCGACGGCTACCGCTCCGCGCTCGGCATGG
CGGGCATCGAAGCCGACCCCGCCCTCGTCCGCTACGGCGACTTCCATGTCGAGGGCGGCTTCGAGCGCGCCCTCGAACTC
CTCGATCTGCCCGAGCCGCCCACCGCGATCTTCGCGGGCAGCGACCTGCAGGCACTCGGCGTCCTGGAGGCGGCCCGAGT
CCGCGGTCTCCGGGTGCCGCAGGACCTGTCGGTGGTCGGCTACGACGACGTGCCGGTGGCTCGCTGGTCGAGCCCGGCCC
TGACGACGGTGCACCAGCCATTGCGGGAGATGGCCGAGGAAGCGGTGCAGATGATCATGCGGTTGCGTGACCAGGAACCG
GTGACCACGCGTCTCGAACTGGCGACGAGCCTCGTCGTCCGCAAGAGCACGGCGGCACCTGCTTCTTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (15-58)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.237	97.368	0.363