Detailed information NTG0658715

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OHA58_RS01305
• Genome accession: NZ_CP108312
• Coordinates: 286770..287798 (-)
• Length: 342 a.a.
• NCBI ID: WP_405475414.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00009
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 281770..292798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA58_RS01280 (OHA58_01280)	-	281811..282794 (+)	984	WP_405475410.1	carbohydrate ABC transporter permease	-
OHA58_RS01285 (OHA58_01285)	-	282863..283624 (+)	762	WP_405484667.1	carbohydrate ABC transporter permease	-
OHA58_RS01290 (OHA58_01290)	-	283689..285422 (+)	1734	WP_405475412.1	amylo-alpha-1,6-glucosidase	-
OHA58_RS01295 (OHA58_01295)	-	285423..286038 (-)	616	Protein_258	sensor histidine kinase	-
OHA58_RS01300 (OHA58_01300)	-	286027..286538 (+)	512	Protein_259	ABC transporter substrate-binding protein	-
OHA58_RS01305 (OHA58_01305)	cytR	286770..287798 (-)	1029	WP_405475414.1	LacI family DNA-binding transcriptional regulator	Regulator
OHA58_RS01310 (OHA58_01310)	-	287929..288330 (+)	402	Protein_261	extracellular solute-binding protein	-
OHA58_RS01315 (OHA58_01315)	-	288312..288873 (+)	562	Protein_262	fibronectin type III-like domain-contianing protein	-
OHA58_RS01320 (OHA58_01320)	-	289148..289837 (+)	690	WP_405475417.1	glycoside hydrolase family 11 protein	-
OHA58_RS01325	-	290136..290771 (+)	636	WP_405484669.1	SsgA family sporulation/cell division regulator	-
OHA58_RS01330 (OHA58_01325)	-	290832..291010 (-)	179	Protein_265	FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37288.69 Da
• Isoelectric Point: 6.4210

>NTDB_id=658715 OHA58_RS01305 WP_405475414.1 286770..287798(-) (cytR) [Streptomyces sp. NBC_00009]
MLQGMRDDEDLGRITLAEVAQKAGVSISTVSKVLNGRQDVAAPTRVKVERLLETHSYRRTTRAAREAPLIELVFHELDSI
WAMELIRGVENVAKAHRASVVLTESGTRHAPAPDWIEGVMQRRPRGVVLVFSALPAEVKQRLQSRSIPFVIVDPAGDPDP
DVPSVGSANWTGGRVATRHLVELGHRRIGIITGPDDMLCSHARLDGYRSALGMAGIEADPALVRYGDFHVEGGFERALEL
LDLPEPPTAIFAGSDLQALGVLEAARVRGLRVPQDLSVVGYDDVPVARWSSPALTTVHQPLREMAEEAVQMIMRLRDQEP
VTTRLELATSLVVRKSTAAPAS

Nucleotide

• Length: 1029 bp

>NTDB_id=658715 OHA58_RS01305 WP_405475414.1 286770..287798(-) (cytR) [Streptomyces sp. NBC_00009]
ATGCTCCAAGGCATGCGTGATGACGAGGACTTGGGCCGCATCACCCTCGCCGAGGTGGCCCAAAAGGCAGGCGTCTCCAT
TTCGACAGTTTCGAAGGTGCTCAACGGGCGGCAGGATGTGGCCGCCCCGACCCGGGTCAAGGTGGAGCGCCTTCTGGAGA
CGCACTCCTACCGGCGCACGACGCGGGCCGCCCGCGAGGCGCCCCTCATCGAGTTGGTCTTCCACGAGCTGGACAGCATC
TGGGCGATGGAGCTGATCCGTGGCGTGGAGAACGTCGCCAAGGCGCACCGGGCAAGCGTCGTGCTGACCGAGAGCGGCAC
CCGCCACGCACCCGCCCCCGACTGGATCGAAGGCGTCATGCAGCGCAGGCCGCGCGGCGTGGTGCTCGTCTTCTCTGCGC
TGCCCGCCGAGGTCAAGCAGCGGCTGCAGTCGCGCTCCATCCCGTTCGTCATCGTCGACCCGGCCGGCGACCCCGACCCG
GACGTACCCTCGGTCGGCTCGGCGAACTGGACCGGGGGGCGGGTCGCCACCCGGCACCTGGTGGAACTCGGCCATCGCCG
CATCGGGATCATCACGGGGCCAGACGACATGCTCTGCTCCCACGCCCGCCTCGACGGCTACCGCTCCGCGCTCGGCATGG
CGGGCATCGAAGCCGACCCCGCCCTCGTCCGCTACGGCGACTTCCATGTCGAGGGCGGCTTCGAGCGCGCCCTCGAACTC
CTCGATCTGCCCGAGCCGCCCACCGCGATCTTCGCGGGCAGCGACCTGCAGGCACTCGGCGTCCTGGAGGCGGCCCGAGT
CCGCGGTCTCCGGGTGCCGCAGGACCTGTCGGTGGTCGGCTACGACGACGTGCCGGTGGCTCGCTGGTCGAGCCCGGCCC
TGACGACGGTGCACCAGCCATTGCGGGAGATGGCCGAGGAAGCGGTGCAGATGATCATGCGGTTGCGTGACCAGGAACCG
GTGACCACGCGTCTCGAACTGGCGACGAGCCTCGTCGTCCGCAAGAGCACGGCGGCACCTGCTTCTTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (15-58)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.237	97.368	0.363