Detailed information NTG0658563

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MKI60_RS07865
• Genome accession: NZ_CP092544
• Coordinates: 1639480..1641945 (-)
• Length: 821 a.a.
• NCBI ID: WP_242413774.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain VMRSA-WC102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1634480..1646945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKI60_RS07840 (MKI60_001553)	-	1634506..1635144 (-)	639	WP_000342258.1	O-methyltransferase	-
MKI60_RS07845 (MKI60_001554)	-	1635429..1635737 (-)	309	WP_000134779.1	DUF1292 domain-containing protein	-
MKI60_RS07850 (MKI60_001555)	ruvX	1635752..1636180 (-)	429	WP_000939059.1	Holliday junction resolvase RuvX	-
MKI60_RS07855 (MKI60_001556)	-	1636184..1636444 (-)	261	WP_000426912.1	IreB family regulatory phosphoprotein	-
MKI60_RS07860 (MKI60_001557)	alaS	1636507..1639137 (-)	2631	WP_000734075.1	alanine--tRNA ligase	-
MKI60_RS07865 (MKI60_001558)	recD2	1639480..1641945 (-)	2466	WP_242413774.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MKI60_RS07870 (MKI60_001559)	-	1641947..1642615 (-)	669	WP_000567021.1	tetratricopeptide repeat protein	-
MKI60_RS07875 (MKI60_001560)	mnmA	1643310..1644428 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
MKI60_RS07880 (MKI60_001561)	-	1644429..1645571 (-)	1143	WP_000409157.1	cysteine desulfurase family protein	-
MKI60_RS07885 (MKI60_001562)	-	1645883..1646896 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-

Sequence

Protein

• Length: 821 a.a.
• Molecular weight: 92517.25 Da
• Isoelectric Point: 4.5084

>NTDB_id=658563 MKI60_RS07865 WP_242413774.1 1639480..1641945(-) (recD2) [Staphylococcus aureus strain VMRSA-WC102]
MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDTMPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAE
TFEKEMPQTKEAIISYLSSDLFKGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQISANQESEKIMIRLH
DLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKADQLARNIGIAYNDNERLKAALLYTLEEECIKQGHTYL
PINVVIDLTVDVLNYQDEEVIEPEKLDEMLQYLNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIEQSDL
QMHIGEIEDANQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVNDDYPVVLAAPTG
RASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQLIFVGDEDQLPSV
GPGQVFKDLIESKAIPRVNLTEVYRQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAVNKGY
TMADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKEN
ALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLLGDPE
AFDIGLKTNGQARLTQLCTLLKNYFNSEDEEMLENTATNDTGASQTTIDDQVEAPMSSNDSGEVTSDSTKTDINVLTEAT
MFKIDPMINMGEITPYDFIER

Nucleotide

• Length: 2466 bp

>NTDB_id=658563 MKI60_RS07865 WP_242413774.1 1639480..1641945(-) (recD2) [Staphylococcus aureus strain VMRSA-WC102]
ATGTCAGACCCTACACTATTTGATTATTCAATGATCAAAGGTACTGTTGAAGCGATATTGTTTCAAAACAGTGATAATTT
TTATACAGTGCTTAAAGTAGATACTATTGAAACAAATGAAGACTTTGATACAATGCCAACTGTTGTAGGGTTTCTTCCGA
ATATTGTTGAAGGCGATGTCTACACATTTAAAGGGCAAGTTGTTGATCATCCACGTTATGGTAAACAATTAAAAGCAGAG
ACTTTTGAAAAAGAAATGCCACAAACGAAAGAAGCAATTATAAGTTATTTATCTAGTGATTTGTTTAAAGGTGTAGGTAA
AAAGACAGCTCAAAATATTGTTAATACATTAGGTGACAATGCGATAAATGATATATTAGATGACCATTCAGTGCTAGAAA
AAGTTTCGGGATTATCTAAAAAGAAACAGAAACAAATTTCAGCAAATCAAGAATCTGAAAAAATAATGATTCGTTTACAT
GATTTAGGGTTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATCTCGGCGATACACTGACTATTTTAGATCGAAA
TCCATATCAATTGATTTATGATATTAAAGGTATTGGTTTTAATAAAGCAGATCAACTTGCTAGAAATATTGGTATCGCTT
ATAACGATAATGAACGATTAAAAGCTGCGTTGCTCTATACGTTAGAAGAAGAATGTATTAAACAGGGACATACATATTTG
CCTATCAATGTTGTTATAGATTTAACGGTTGATGTATTAAATTATCAAGATGAAGAGGTCATCGAACCTGAAAAATTAGA
CGAAATGTTGCAATACTTAAATGAGGAAAAACGACTAATTATTGACAATGAACAAGTTGCAATTCCAAGTTTGTATTATT
CTGAAATCAAAAGTGTTCAAAACTTATTCAGAATAAAGACGCATACAAATAAACTTACGGAAATTGAACAGTCAGATTTA
CAAATGCATATTGGTGAAATAGAAGATGCGAATCAAGTGAACTATGCAGCTTCACAAAAAGAAGCTTTGCAAACGGCTAT
CAATTCTAAGGTGATGCTATTAACCGGTGGACCGGGAACAGGAAAGACGACAGTAATTAAAGGTATTGTAGAATTATATG
CTGAGATTCATGGCTTATCATTAGATTATGATGATTATGTCAATGATGATTATCCAGTTGTATTAGCAGCGCCAACAGGA
AGAGCGTCTAAGAGACTACAAGAGTCAACTGGATTAGAAGCAATGACGATTCATCGTTTAATAGGTTGGAATCAAGACAC
AAAGCCAGAGGATATATTAGAAAATGAAATAAACGCACGACTCATAATCATTGATGAGATGTCTATGGTAGATACTTGGT
TGTTTCACCAATTTTTAAGTGCAGTTCCTTTAGATGCACAATTGATATTTGTAGGTGATGAGGACCAATTGCCTTCTGTA
GGTCCTGGTCAAGTATTTAAAGATTTAATTGAATCGAAAGCTATACCACGAGTTAATCTGACTGAAGTATATCGTCAACA
AGATGGTTCAAGCATTATAGAATTAGCACATCGAATGAAATTGGGTCAGAAAATTGATATTACACAGCGTTTTCATGATA
GAAGTTTTATTAACTGTCAGGCAAACCAAATACCAACAGTTGTTGAGAAGGTAGTTACTAGTGCTGTTAATAAAGGGTAT
ACTATGGCTGATATTCAAGTGCTTGCACCAATGTATAAAGGAAATGCCGGTATTAAACGTTTAAATCAAGTTTTACAAGA
TATTTTAAACCCTAAAAAGAAAGACACACGAGAAATTGAGTTTGGTGATGTAGTCTTTAGAAAAGGTGACAAAGTATTAC
AACTTGTTAATAGGCCAAATGATAACATATTCAATGGTGACATAGGAGTTATTGTTGGTATTTTTTGGGCGAAAGAAAAT
GCCCTTAATAAAGATGTACTTGTTGTGGATTTTGAAGGTAATGAAATTACATTTACGAAACAAGATATGATGGAATTAAC
ACATGCTTATTGTACATCAATCCATAAATCACAAGGTTCAGAATTTCCTATTGTTATCATGCCTATTGTTAAACAGTATT
TTAGAATGTTACAAAGACCGATATTATATACTGGTTTAACTAGAGCGAAAACGAGTTTAGTTCTACTTGGTGATCCAGAA
GCATTTGATATTGGATTAAAAACAAATGGTCAAGCGCGTTTAACACAATTATGTACATTGTTGAAAAATTATTTTAATTC
AGAAGATGAAGAAATGCTGGAAAACACAGCAACTAATGATACAGGAGCTTCACAAACGACAATAGATGATCAAGTAGAAG
CGCCAATGTCATCGAATGATAGTGGAGAAGTTACGTCTGATTCAACAAAAACAGATATAAATGTATTAACGGAAGCTACA
ATGTTTAAAATTGACCCAATGATTAATATGGGAGAAATCACGCCGTATGACTTTATAGAACGTTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (335-540)

• Helix-hairpin-helix containing domain (HHH_RecD2) (149-239)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (668-716)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (581-651)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.855	91.717	0.485