Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OG953_RS15590 Genome accession   NZ_CP108256
Coordinates   3394168..3394293 (-) Length   41 a.a.
NCBI ID   WP_405684840.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00057     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3389168..3399293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG953_RS15575 (OG953_15555) - 3390057..3391154 (+) 1098 WP_405684837.1 threonine synthase -
  OG953_RS15580 (OG953_15560) - 3391231..3393858 (+) 2628 WP_405684838.1 discoidin domain-containing protein -
  OG953_RS15585 (OG953_15565) - 3393875..3394057 (-) 183 WP_405684839.1 hypothetical protein -
  OG953_RS15590 (OG953_15570) rcrP 3394168..3394293 (-) 126 WP_405684840.1 hypothetical protein Regulator
  OG953_RS15595 (OG953_15575) - 3394636..3395922 (-) 1287 WP_405684841.1 IPT/TIG domain-containing protein -
  OG953_RS15600 (OG953_15580) - 3396201..3396947 (-) 747 WP_405684843.1 IPT/TIG domain-containing protein -
  OG953_RS15605 (OG953_15585) - 3398213..3398782 (+) 570 WP_405684844.1 carbonic anhydrase -
  OG953_RS15610 (OG953_15590) - 3398805..3399060 (-) 256 Protein_3105 Txe/YoeB family addiction module toxin -
  OG953_RS15615 (OG953_15595) - 3399053..3399184 (-) 132 Protein_3106 type II toxin-antitoxin system prevent-host-death family antitoxin -

Sequence

Protein


Download         Length: 41 a.a.        Molecular weight: 4469.07 Da        Isoelectric Point: 4.3548

>NTDB_id=657391 OG953_RS15590 WP_405684840.1 3394168..3394293(-) (rcrP) [Streptomyces sp. NBC_00057]
MVDADRIVVREQGRIVQQGTCEQLLADTEGLFARPAGPQLS

Nucleotide


Download         Length: 126 bp        

>NTDB_id=657391 OG953_RS15590 WP_405684840.1 3394168..3394293(-) (rcrP) [Streptomyces sp. NBC_00057]
GTGGTCGACGCCGACCGCATCGTCGTCAGGGAACAGGGGCGCATCGTGCAGCAGGGCACCTGCGAACAGCTTCTCGCGGA
CACCGAGGGCCTCTTCGCCCGGCCGGCCGGACCTCAGCTGTCCTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

43.902

100

0.439