Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA64_RS27675 Genome accession   NZ_CP108242
Coordinates   6056525..6057649 (-) Length   374 a.a.
NCBI ID   WP_405617445.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00076     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6051525..6062649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA64_RS27650 (OHA64_27580) cseB 6051850..6052554 (-) 705 WP_405617437.1 two-component system response regulator CseB -
  OHA64_RS27655 (OHA64_27585) - 6052706..6053299 (-) 594 WP_405624134.1 hypothetical protein -
  OHA64_RS27660 (OHA64_27590) - 6053407..6053946 (-) 540 WP_053755415.1 SigE family RNA polymerase sigma factor -
  OHA64_RS27665 (OHA64_27595) - 6054169..6055104 (-) 936 WP_405617440.1 A/G-specific adenine glycosylase -
  OHA64_RS27670 (OHA64_27600) - 6055592..6056431 (+) 840 WP_405617442.1 hypothetical protein -
  OHA64_RS27675 (OHA64_27605) disA 6056525..6057649 (-) 1125 WP_405617445.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA64_RS27680 (OHA64_27610) radA 6057731..6059140 (-) 1410 WP_405617447.1 DNA repair protein RadA Machinery gene
  OHA64_RS27685 (OHA64_27615) - 6059369..6061120 (+) 1752 WP_405617449.1 BACON domain-containing protein -
  OHA64_RS27690 (OHA64_27620) - 6061237..6062085 (-) 849 WP_405617451.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40096.89 Da        Isoelectric Point: 5.0961

>NTDB_id=657029 OHA64_RS27675 WP_405617445.1 6056525..6057649(-) (disA) [Streptomyces sp. NBC_00076]
MAANDRAAAPGKSGGSSGADGMMRASLSAVAPGTALRDGLERVLRGNTGGLILLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVHGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=657029 OHA64_RS27675 WP_405617445.1 6056525..6057649(-) (disA) [Streptomyces sp. NBC_00076]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGTTCCGGTGCCGATGGCATGATGCGTGCCTCACT
GAGCGCCGTGGCTCCCGGTACAGCCCTGCGCGACGGCCTTGAGCGGGTCCTGCGCGGCAACACCGGCGGGCTCATCCTGC
TCGGCTCCGACAAGACCGTCGAATCGATGTGTACGGGCGGTTTCGTCCTGGATGTCGAGTTCACGGCGACGCGACTGCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCCGACCTGTCGAAGATCCTCCGGGCGGGCGTCCAACTGCTCCC
CGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTTCACGGTCAGCGCCGTGTCCTCGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCACTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCTCGGCCGTGGCCCAGCGTCTGGAGATGGTCCGCCGTATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACGGACGGGCGGCTGCTGGCGTTGCAGCTGGACGAGTTGATCGCC
GGCGTGGAACCCGAGCGTGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCCACCGCGAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTACGAACTCGACGCGCTCACCCACGCCGAGCTTCTCGAACTACCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCACCGGAGGCACTCGACTCGGCGGTGTCCCCGCGGGGCTTCAGGCTGCTGGCGAAGGTGCCCAGGCTGCCGGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGTGGCCTGCAGAAGTTGCTGGCCGCGAGCGTGGACGACCTGCAGGCCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGGAGCGTGCGGGAGGGGCTCTCCCGGCTGGCCGAGTCGTCGATCCTGGAGCGCTATG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438