Detailed information NTG0656306

Bioinformatically predicted

Overview

• Name: recR
• Type: Machinery gene
• Locus tag: MF271_RS16295
• Genome accession: NZ_CP092190
• Coordinates: 2686990..2687622 (-)
• Length: 210 a.a.
• NCBI ID: WP_239049701.1
• Uniprot ID: -
• Organism: Deinococcus sp. KNUC1210
• Function: promote later steps in plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 2681990..2692622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MF271_RS16260 (MF271_16260)	-	2683415..2684449 (-)	1035	WP_239049696.1	thiamine ABC transporter substrate binding subunit	-
MF271_RS16265 (MF271_16265)	-	2684659..2685108 (+)	450	WP_239049697.1	NUDIX domain-containing protein	-
MF271_RS16270 (MF271_16270)	-	2685195..2685479 (-)	285	WP_239051147.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
MF271_RS16275 (MF271_16275)	-	2685526..2685792 (-)	267	Protein_2704	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
MF271_RS16280 (MF271_16280)	-	2685832..2686137 (-)	306	WP_239049698.1	roadblock/LC7 domain-containing protein	-
MF271_RS16285 (MF271_16285)	-	2686155..2686526 (-)	372	WP_239049699.1	roadblock/LC7 domain-containing protein	-
MF271_RS16290 (MF271_16290)	-	2686523..2686873 (-)	351	WP_239049700.1	roadblock/LC7 domain-containing protein	-
MF271_RS16295 (MF271_16295)	recR	2686990..2687622 (-)	633	WP_239049701.1	recombination mediator RecR	Machinery gene
MF271_RS16300 (MF271_16300)	-	2687672..2687968 (-)	297	WP_189088596.1	YbaB/EbfC family nucleoid-associated protein	-
MF271_RS16305 (MF271_16305)	-	2688046..2688315 (-)	270	WP_239049702.1	hypothetical protein	-
MF271_RS16310 (MF271_16310)	-	2688345..2689025 (-)	681	WP_239049703.1	NUDIX domain-containing protein	-
MF271_RS16315 (MF271_16315)	-	2689191..2689799 (+)	609	WP_239049704.1	GNAT family N-acetyltransferase	-
MF271_RS16320 (MF271_16320)	-	2689872..2690345 (+)	474	WP_239049705.1	hypothetical protein	-
MF271_RS16325 (MF271_16325)	-	2690408..2691466 (+)	1059	WP_239049706.1	peptidylprolyl isomerase	-
MF271_RS16330 (MF271_16330)	-	2691595..2692203 (+)	609	WP_239051131.1	TetR family transcriptional regulator C-terminal domain-containing protein	-
MF271_RS16335 (MF271_16335)	-	2692214..2692597 (-)	384	WP_239049707.1	hypothetical protein	-

Sequence

Protein

• Length: 210 a.a.
• Molecular weight: 22739.18 Da
• Isoelectric Point: 5.0944

>NTDB_id=656306 MF271_RS16295 WP_239049701.1 2686990..2687622(-) (recR) [Deinococcus sp. KNUC1210]
MKYPPSLVALIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLSSALLEAKRDLHTCPICFNITDAEMCDVCSDPSRDQA
IICVVEEPGDVIAIERSGEYTGLYHVLHGVISPMNGVGPDKLYIKALLPRLRAAQEIILATGTTVEGEATALYLQRLLEP
LGAKVSRIAYGLPVGGALEYADEVTLGRALSGRQTLTHGTQPADSELPPA

Nucleotide

• Length: 633 bp

>NTDB_id=656306 MF271_RS16295 WP_239049701.1 2686990..2687622(-) (recR) [Deinococcus sp. KNUC1210]
GTGAAGTACCCACCCAGTCTGGTCGCCCTGATCCGCGAGCTGTCGCGGCTGCCGGGTATCGGCCCCAAGAGCGCTCAGCG
ACTCGCGTTCCACCTGTTCGAGCAGCCCCGTGAGGACATCGAGCGGCTGTCATCGGCGCTGCTGGAAGCCAAGCGCGACC
TGCACACCTGCCCCATCTGTTTCAATATCACCGACGCCGAGATGTGCGACGTGTGCAGCGACCCCAGCCGCGATCAGGCG
ATCATCTGCGTGGTCGAGGAACCGGGCGACGTGATCGCCATCGAGCGCAGCGGCGAATATACCGGGCTGTATCACGTGCT
GCACGGCGTCATTTCACCGATGAACGGTGTCGGGCCAGACAAGCTGTACATCAAGGCGCTGCTGCCCAGGCTGCGGGCGG
CGCAGGAAATCATTCTGGCGACCGGCACCACCGTCGAAGGCGAGGCGACCGCGCTGTATCTACAGCGCCTGCTGGAGCCG
CTGGGAGCCAAGGTGTCGCGTATCGCCTACGGCCTGCCGGTGGGCGGAGCGCTGGAATACGCCGACGAGGTGACGCTGGG
ACGGGCGCTTTCGGGCCGCCAGACCCTGACGCACGGCACCCAGCCCGCCGATTCGGAGCTGCCCCCCGCCTGA

Domains

Predicted by InterproScan.

• Toprim domain (Toprim_4) (81-169)

• RecR protein (RecR_ZnF) (40-78)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recR	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	84.653	96.19	0.814