Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   MA849_RS06730 Genome accession   NZ_CP092020
Coordinates   1322436..1322951 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter jejuni subsp. jejuni strain 14991B     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1317436..1327951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA849_RS06715 (MA849_06715) - 1317548..1319365 (-) 1818 WP_238518825.1 motility associated factor glycosyltransferase family protein -
  MA849_RS06720 (MA849_06720) - 1319362..1321185 (-) 1824 WP_238518826.1 motility associated factor glycosyltransferase family protein -
  MA849_RS06725 (MA849_06725) - 1321195..1322436 (-) 1242 WP_238518827.1 DUF2920 family protein -
  MA849_RS06730 (MA849_06730) ctsG 1322436..1322951 (-) 516 WP_002875272.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MA849_RS06735 (MA849_06735) tsaD 1322952..1323959 (-) 1008 WP_238507344.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  MA849_RS06740 (MA849_06740) - 1323956..1325350 (-) 1395 WP_052814049.1 M99 family carboxypeptidase catalytic domain-containing protein -
  MA849_RS06745 (MA849_06745) dxr 1325352..1326422 (-) 1071 WP_002898669.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  MA849_RS06750 (MA849_06750) cdsA 1326419..1327144 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  MA849_RS06755 (MA849_06755) - 1327153..1327491 (-) 339 WP_002855905.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=655135 MA849_RS06730 WP_002875272.1 1322436..1322951(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain 14991B]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=655135 MA849_RS06730 WP_002875272.1 1322436..1322951(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain 14991B]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936