Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   MA544_RS07665 Genome accession   NZ_CP092017
Coordinates   1464529..1465044 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni subsp. jejuni strain 15065A     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1459529..1470044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA544_RS07650 (MA544_07650) - 1459641..1461458 (-) 1818 WP_238523074.1 motility associated factor glycosyltransferase family protein -
  MA544_RS07655 (MA544_07655) - 1461455..1463278 (-) 1824 WP_011049961.1 motility associated factor glycosyltransferase family protein -
  MA544_RS07660 (MA544_07660) - 1463288..1464529 (-) 1242 WP_002873625.1 DUF2920 family protein -
  MA544_RS07665 (MA544_07665) ctsG 1464529..1465044 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MA544_RS07670 (MA544_07670) tsaD 1465045..1466052 (-) 1008 WP_002864246.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  MA544_RS07675 (MA544_07675) - 1466049..1467443 (-) 1395 WP_057035794.1 M99 family carboxypeptidase catalytic domain-containing protein -
  MA544_RS07680 (MA544_07680) dxr 1467445..1468515 (-) 1071 WP_002898669.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  MA544_RS07685 (MA544_07685) cdsA 1468512..1469237 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  MA544_RS07690 (MA544_07690) - 1469246..1469584 (-) 339 WP_002855905.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=655083 MA544_RS07665 WP_002799196.1 1464529..1465044(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain 15065A]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=655083 MA544_RS07665 WP_002799196.1 1464529..1465044(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain 15065A]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942