Detailed information NTG0653589

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG446_RS11495
• Genome accession: NZ_CP108100
• Coordinates: 2576069..2577367 (-)
• Length: 432 a.a.
• NCBI ID: WP_148018684.1
• Uniprot ID: A0ABY9IW47
• Organism: Streptomyces sp. NBC_00236
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2571069..2582367

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG446_RS11485 (OG446_11500)	-	2572234..2574855 (-)	2622	WP_328893934.1	valine--tRNA ligase	-
OG446_RS11490 (OG446_11505)	-	2574996..2575994 (+)	999	WP_328893935.1	hypothetical protein	-
OG446_RS11495 (OG446_11510)	clpX	2576069..2577367 (-)	1299	WP_148018684.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG446_RS11500 (OG446_11515)	clpP	2577525..2578208 (-)	684	WP_306070064.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG446_RS11505 (OG446_11520)	-	2578289..2578894 (-)	606	WP_168713553.1	ATP-dependent Clp protease proteolytic subunit	-
OG446_RS11510 (OG446_11525)	tig	2579160..2580554 (-)	1395	WP_328893936.1	trigger factor	-
OG446_RS11525 (OG446_11540)	-	2581134..2581328 (-)	195	WP_328893937.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47403.23 Da
• Isoelectric Point: 4.8390

>NTDB_id=653589 OG446_RS11495 WP_148018684.1 2576069..2577367(-) (clpX) [Streptomyces sp. NBC_00236]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=653589 OG446_RS11495 WP_148018684.1 2576069..2577367(-) (clpX) [Streptomyces sp. NBC_00236]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGTGCGAACCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATTCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTTCAGCAGGCCC
TGCTGAAGATCCTTGAGGGGACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAAGCCATCGCGGATCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACC
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGAGGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516