Detailed information NTG0653381

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OHT52_RS26850
• Genome accession: NZ_CP108093
• Coordinates: 6150898..6152274 (+)
• Length: 458 a.a.
• NCBI ID: WP_328722753.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00247
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6145898..6157274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT52_RS26830 (OHT52_26815)	-	6146907..6147704 (-)	798	WP_328722749.1	peptidylprolyl isomerase	-
OHT52_RS26835 (OHT52_26820)	-	6147855..6148541 (+)	687	WP_328722750.1	MBL fold metallo-hydrolase	-
OHT52_RS26840 (OHT52_26825)	hisS	6148558..6149820 (+)	1263	WP_328722751.1	histidine--tRNA ligase	-
OHT52_RS26845 (OHT52_26830)	-	6150156..6150791 (+)	636	WP_328722752.1	vitamin K epoxide reductase family protein	-
OHT52_RS26850 (OHT52_26835)	rarA	6150898..6152274 (+)	1377	WP_328722753.1	replication-associated recombination protein A	Machinery gene
OHT52_RS26855 (OHT52_26840)	rpsD	6152586..6153200 (+)	615	WP_018524225.1	30S ribosomal protein S4	-
OHT52_RS26860 (OHT52_26845)	-	6153220..6155436 (-)	2217	WP_328722754.1	AAA family ATPase	-
OHT52_RS26865 (OHT52_26850)	-	6155668..6156114 (+)	447	WP_328723910.1	DUF948 domain-containing protein	-
OHT52_RS26870 (OHT52_26855)	-	6156122..6156478 (+)	357	WP_328722755.1	DUF6167 family protein	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 48776.14 Da
• Isoelectric Point: 6.5140

>NTDB_id=653381 OHT52_RS26850 WP_328722753.1 6150898..6152274(+) (rarA) [Streptomyces sp. NBC_00247]
MEPDLFTAAAEERQEKDPSSSPLAVRMRPRVLDEVLGQQHLLKQGSPLRRLVGEAGGGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPHF
SIISPLLSRSLLLTLESLTEDDVRALLRRSLTDERGLGGAVTLPEDAEDHLLRIAGGDARRALTALEAAAGAALAKHEAE
ITLSTVEETVDRAAVRYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVALIGFPEAALTLSHATIALALAPKSNAATLAITAAREDVRKGLAGPVPAHLRDGHYAGAAKLGHAQGYVY
PHDVPGGIAAQEYAPEAVRGRRYYTPTRYGAEARYADVADRVRERLGRTDGDAGARER

Nucleotide

• Length: 1377 bp

>NTDB_id=653381 OHT52_RS26850 WP_328722753.1 6150898..6152274(+) (rarA) [Streptomyces sp. NBC_00247]
GTGGAGCCCGATCTTTTTACCGCAGCCGCCGAAGAACGCCAGGAGAAGGACCCGTCCAGCAGCCCCCTCGCTGTCCGGAT
GCGCCCCCGGGTCCTGGACGAGGTCCTCGGCCAGCAGCACCTGCTGAAGCAGGGCTCCCCGCTCCGCCGGCTCGTCGGCG
AGGCCGGTGGCGGTCCGGCCGGCCCGTCCTCGGTGATCCTCTGGGGCCCTCCCGGCACCGGCAAGACCACCCTCGCGTAC
GTGGTCAGCAAGGCCACCAACAAGCGGTTCGTCGAACTCTCGGCGATCACCGCCGGCGTCAAGGAGGTCCGGGCCGTCAT
CGACGGTGCCCGCCGGGCGTCCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCTCCAAGG
CCCAGCAGGACTCCCTGCTCCCCGCCGTCGAGAACCGCTGGGTCACGCTGATCGCGGCGACCACCGAGAACCCCCATTTC
TCCATCATCTCGCCGCTGCTGTCGCGCTCCCTGCTGCTCACCCTGGAATCCCTCACCGAGGACGACGTGCGCGCCCTGCT
GCGCCGTTCTCTCACCGACGAACGTGGTCTCGGCGGTGCGGTGACGCTTCCCGAGGACGCGGAGGACCATCTGCTGCGCA
TCGCGGGGGGTGACGCCCGCCGCGCGCTCACCGCGCTGGAGGCCGCCGCCGGGGCCGCCCTGGCGAAGCACGAGGCGGAG
ATCACCCTCTCGACCGTCGAGGAGACGGTCGACCGGGCCGCCGTGCGGTACGACCGGGACGGCGACCAGCACTACGACGT
GGCGAGCGCTCTGATCAAGTCGATCCGGGGCTCGGACGTGGACGCGGCGCTGCACTATCTGGCGCGCATGATCGAGGCGG
GGGAGGACCCCCGGTTCATCGCCCGCCGGCTGATGATCTCGGCCAGCGAGGACATCGGTCTCGCCGACCCGACCGCCCTG
CCGACGGCGGTCGCCGCCGCCCAGGCCGTCGCCCTGATCGGCTTCCCCGAAGCGGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCCCTCGCCCCCAAGTCGAACGCGGCGACCCTGGCGATCACGGCCGCCCGTGAAGACGTCCGCAAGGGCCTGG
CCGGCCCGGTCCCGGCGCATCTGCGCGACGGCCACTACGCGGGCGCCGCCAAGCTGGGGCACGCCCAGGGATACGTCTAC
CCGCACGACGTCCCCGGCGGCATCGCCGCCCAGGAGTACGCCCCCGAGGCGGTCCGGGGGCGCCGGTACTACACCCCCAC
CCGGTACGGCGCCGAGGCCCGGTACGCCGACGTGGCGGACCGGGTCCGCGAGCGCCTCGGCCGCACGGACGGCGACGCCG
GGGCGCGCGAGCGCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	43.823	93.668	0.41