Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OHT21_RS11775 Genome accession   NZ_CP108054
Coordinates   2609194..2609976 (+) Length   260 a.a.
NCBI ID   WP_033318887.1    Uniprot ID   A0ABX0DTU1
Organism   Streptomyces sp. NBC_00286     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2604194..2614976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - dinR/lexA 2609194..2609976 (+) 783 - - Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 28193.99 Da        Isoelectric Point: 8.0892

>NTDB_id=652158 OHT21_RS11775 WP_033318887.1 2609194..2609976(+) (dinR/lexA) [Streptomyces sp. NBC_00286]
MTTTADSATITAQDRSQGRLEPVHAMNEALNQEGPKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMR
EIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSTVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVE
DVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKRENGHVWLLPHNSAYQ
PIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 783 bp        

>NTDB_id=652158 OHT21_RS11775 WP_033318887.1 2609194..2609976(+) (dinR/lexA) [Streptomyces sp. NBC_00286]
GTGACCACCACCGCAGATAGCGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCCATGAA
TGAAGCATTGAATCAGGAGGGACCCAAGCCCACACGCTCCCTGCCGGGCCGACCTCCGGGAATCCGGGCGGACAGCTCCG
GACTCACCGACCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCCGTGCAGCGGCGCGGGTACCCGCCGTCGATGCGG
GAGATCGGGCAGGCCGTGGGCCTCTCCAGCACCTCCTCCGTCGCCCACCAGCTGATGGCACTCGAACGCAAGGGCTTCCT
GCGGCGCGACCCGCACCGGCCCCGCGCCTACGAGGTCCGCGGATCCGACCAGTCCACGGTCCAGCCCACCGACACGGCGG
GCAAGCCGGCAGCCTCGTACGTCCCGCTGGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTCGAG
GACGTGTTCCCGCTGCCGCGACAGCTGGTCGGGGACGGCGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGA
GGCCGCGATCTGCGACGGGGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCGCGATGC
TGGACGGCGAAGCCACGGTCAAGCGCTTCAAGCGCGAGAACGGTCATGTGTGGCTGCTGCCTCACAACTCCGCGTACCAG
CCGATTCCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTGGCGGTGCTGCGGCGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(53-116)

Peptidase S24-like (Peptidase_S24)

(142-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.238

80.769

0.365