Detailed information    

insolico Bioinformatically predicted

Overview

Name   recD2   Type   Machinery gene
Locus tag   LZS83_RS21725 Genome accession   NZ_CP091444
Coordinates   4233341..4235677 (-) Length   778 a.a.
NCBI ID   WP_063222864.1    Uniprot ID   A0A2B0X0P1
Organism   Bacillus cereus strain MO2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4228341..4240677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS21700 - 4231003..4231347 (+) 345 WP_242256441.1 PH domain-containing protein -
  LZS83_RS21705 - 4231386..4232453 (-) 1068 WP_063222865.1 AI-2E family transporter -
  LZS83_RS21710 - 4232630..4232842 (+) 213 WP_060632362.1 hypothetical protein -
  LZS83_RS21715 - 4232878..4233006 (-) 129 WP_001053553.1 YrzQ family protein -
  LZS83_RS21720 - 4233025..4233213 (-) 189 WP_000469281.1 hypothetical protein -
  LZS83_RS21725 recD2 4233341..4235677 (-) 2337 WP_063222864.1 ATP-dependent RecD-like DNA helicase Machinery gene
  LZS83_RS21730 - 4235773..4236432 (-) 660 WP_309259357.1 tetratricopeptide repeat protein -
  LZS83_RS21735 mnmA 4236543..4237658 (-) 1116 WP_016135363.1 tRNA 2-thiouridine(34) synthase MnmA -
  LZS83_RS21740 - 4237675..4238820 (-) 1146 WP_309259358.1 cysteine desulfurase family protein -
  LZS83_RS21745 cymR 4238856..4239272 (-) 417 WP_000704116.1 cysteine metabolism transcriptional regulator CymR -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87233.72 Da        Isoelectric Point: 5.1441

>NTDB_id=651211 LZS83_RS21725 WP_063222864.1 4233341..4235677(-) (recD2) [Bacillus cereus strain MO2]
MGNQHAMDLFEEEKKFIKAQVLHTIFHNEENLYSVVSMKVIETNETYDEKKVMINGHFPRMHEDEMFTLTGHFKDHPKYG
KQYLVETFKKELPQTKAGMVQYLASDLFKGIGKRTAEKIVDHLGEHAISKIMDDPEALSGVVNKQKAQEIYETIVEHQGL
EKVMSFLNGYGFGTKLSIKIYQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHDDRVRAGCFYTLENVS
LQLGHVYMGKDQLVRETMSLLNSQEGRVTEEDIIGCVEMMQSEGKVIIEEERVYLASLFYSEKGVVKSIRRLMNQEETPS
FPEAEVLKTLGEIEEQLTVQYAPLQQEAIQTALHKPMMLLTGGPGTGKTTVIKGIVEMYASLHGLSLNPNEYSDDNPFPI
LLTAPTGRAAKRMSESTGLPACTIHRLLGWTPEGSFQRNETDPVQGKLLIIDEFSMVDIWLANQLFKSLPTNIQVIVVGD
EDQLPSVGPGQVLKDLLNAGAVPTVKLTEIYRQAEGSSVIQLAHAIKNGTLPPDLAQNQKDRSFIGCTGAQIVEVVKKVC
ENAKTKGFSARDVQVLAPMYRGPAGINVLNEALQEVFNPKREKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIV
SVFYAKENVEQQDMIIVSFDGIEVTYTKPDLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKF
LIICGEEAAFQSGVNRLDDAMRQTTLASRLQESQGEVQIVTVNGEEMDVENISPYDFM

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=651211 LZS83_RS21725 WP_063222864.1 4233341..4235677(-) (recD2) [Bacillus cereus strain MO2]
ATGGGAAATCAACATGCAATGGATTTGTTTGAGGAAGAGAAAAAGTTTATAAAAGCGCAAGTTCTTCATACCATTTTCCA
CAACGAAGAAAACCTCTATTCCGTTGTCAGTATGAAAGTCATTGAAACAAATGAAACGTACGACGAAAAAAAAGTGATGA
TAAATGGTCATTTTCCCCGTATGCATGAAGATGAAATGTTTACATTGACAGGTCATTTTAAGGATCATCCAAAGTATGGG
AAACAATATTTAGTTGAAACATTTAAAAAAGAATTACCGCAAACAAAAGCAGGTATGGTGCAATATTTAGCGAGTGATTT
ATTTAAAGGAATCGGAAAGCGTACAGCTGAAAAAATTGTGGACCATCTTGGGGAACATGCCATTTCTAAAATTATGGATG
ATCCTGAGGCGTTAAGTGGTGTTGTCAACAAACAAAAAGCGCAGGAAATATATGAGACAATTGTTGAGCATCAAGGGCTA
GAGAAAGTAATGAGCTTTTTAAATGGTTACGGTTTTGGAACGAAGCTTTCTATTAAGATTTACCAACAATATAAAGAGAT
GACGTTAGAAGTGATTCGTAATAATCCATATCAACTTATTGAAGAAGTGGACGGCATTGGCTTTGGACGAGCAGATGATA
TAGGACGTGCGTTAGGGATATCGGGTAATCACGATGATCGTGTACGTGCAGGATGTTTTTATACGCTAGAGAATGTTTCA
CTGCAACTCGGTCACGTTTATATGGGAAAAGATCAACTTGTAAGAGAAACGATGTCACTTTTAAACAGCCAAGAAGGAAG
AGTGACAGAGGAAGACATTATAGGCTGCGTTGAAATGATGCAAAGTGAAGGGAAAGTCATAATAGAAGAAGAACGAGTGT
ATTTAGCATCGTTATTCTACTCTGAAAAAGGTGTTGTAAAGTCTATTCGCAGGCTTATGAATCAAGAAGAAACACCTTCA
TTTCCTGAAGCTGAAGTGTTAAAGACGTTAGGTGAAATTGAAGAACAGCTGACTGTTCAGTATGCACCGCTTCAGCAAGA
AGCAATTCAAACGGCACTTCATAAACCGATGATGTTATTGACAGGTGGACCAGGAACAGGGAAAACCACAGTTATTAAAG
GAATTGTTGAAATGTATGCGTCACTTCACGGGCTATCGTTAAATCCGAATGAATATAGTGATGATAATCCATTTCCAATA
TTATTAACGGCTCCAACGGGAAGAGCGGCGAAGCGTATGAGTGAATCAACAGGTCTTCCAGCTTGTACAATTCATCGTTT
ACTTGGCTGGACACCAGAAGGGTCTTTCCAACGTAATGAAACGGACCCGGTACAAGGGAAATTGCTCATAATTGATGAAT
TTTCAATGGTTGATATTTGGCTTGCGAATCAGCTGTTTAAATCACTGCCGACAAACATTCAAGTTATCGTTGTAGGTGAT
GAAGATCAGTTGCCATCTGTAGGACCAGGACAAGTGTTGAAAGATTTATTGAATGCAGGTGCAGTTCCAACAGTAAAGCT
TACTGAGATTTATCGTCAAGCGGAAGGTTCATCTGTTATCCAACTTGCCCATGCGATAAAAAATGGAACGCTCCCGCCAG
ATTTAGCGCAAAACCAAAAAGATCGTTCGTTTATTGGCTGTACAGGAGCACAAATTGTTGAGGTTGTTAAGAAGGTTTGT
GAAAATGCTAAGACAAAAGGGTTTAGCGCAAGAGATGTACAAGTGTTGGCCCCGATGTATCGTGGACCGGCTGGTATTAA
TGTACTAAACGAAGCGTTGCAAGAAGTGTTTAATCCGAAAAGGGAAAAGAGTAAAGAAATTGCTTACGGTGATGTTGTAT
ATCGAAGAGGCGATAAAGTACTACAGCTTGTTAATCAGCCGGAGAGCCAAGTGTTTAATGGTGATATCGGAGAAATTGTT
TCGGTGTTTTATGCGAAAGAGAACGTTGAGCAACAAGATATGATTATCGTTTCATTTGATGGAATTGAGGTAACATATAC
AAAGCCGGATTTAAATCAAATTACACATGCATATTGTTGTTCGATTCATAAATCGCAAGGTAGTGAATTTCCGATTGTGA
TTATGCCGATAGTAAAAAGTTACAATCGTATGTTACGTCGTAATTTAATTTATACTGGTATTACAAGAAGTAAGAAGTTC
CTTATTATTTGCGGGGAGGAAGCCGCTTTCCAGTCTGGTGTAAATCGCCTTGATGATGCAATGCGTCAAACGACTTTAGC
TAGTCGTTTGCAAGAATCACAAGGAGAAGTACAGATAGTAACAGTTAATGGTGAAGAAATGGACGTGGAAAACATTTCAC
CGTATGATTTCATGTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix containing domain (HHH_RecD2)

(156-247)

ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13)

(589-659)

AAA domain (AAA_30)

(341-548)

UvrD-like helicase C-terminal domain (UvrD_C_2)

(676-724)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0X0P1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recD2 Bacillus subtilis subsp. subtilis str. 168

57.016

100

0.58