Detailed information NTG0650543

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z08_RS07445
• Genome accession: NZ_CP091366
• Coordinates: 1541451..1542152 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB171-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1536451..1547152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z08_RS07410 (L2Z08_07405)	kdsB	1536974..1537735 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z08_RS07415 (L2Z08_07410)	-	1537747..1538727 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z08_RS07420 (L2Z08_07415)	-	1538739..1539080 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z08_RS07425 (L2Z08_07420)	-	1539098..1539871 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z08_RS07430 (L2Z08_07425)	-	1539909..1540517 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z08_RS07435 (L2Z08_07430)	-	1540527..1541081 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z08_RS07440 (L2Z08_07435)	xcpV	1541071..1541451 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z08_RS07445 (L2Z08_07440)	xcpW	1541451..1542152 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z08_RS07450 (L2Z08_07445)	gspK	1542152..1543111 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z08_RS07455 (L2Z08_07450)	-	1543342..1543938 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z08_RS07460 (L2Z08_07455)	ung	1543989..1544702 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z08_RS07465 (L2Z08_07460)	-	1544699..1545823 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z08_RS07470 (L2Z08_07465)	tadA	1545830..1546333 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z08_RS07475 (L2Z08_07470)	-	1546403..1546846 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650543 L2Z08_RS07445 WP_000594589.1 1541451..1542152(+) (xcpW) [Acinetobacter baumannii strain AB171-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650543 L2Z08_RS07445 WP_000594589.1 1541451..1542152(+) (xcpW) [Acinetobacter baumannii strain AB171-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996