Detailed information NTG0650053

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z25_RS18360
• Genome accession: NZ_CP091350
• Coordinates: 3812764..3813465 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB212-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3807764..3818465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z25_RS18325 (L2Z25_18320)	kdsB	3808287..3809048 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z25_RS18330 (L2Z25_18325)	-	3809060..3810040 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z25_RS18335 (L2Z25_18330)	-	3810052..3810393 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z25_RS18340 (L2Z25_18335)	-	3810411..3811184 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z25_RS18345 (L2Z25_18340)	-	3811222..3811830 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z25_RS18350 (L2Z25_18345)	-	3811840..3812394 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z25_RS18355 (L2Z25_18350)	xcpV	3812384..3812764 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z25_RS18360 (L2Z25_18355)	xcpW	3812764..3813465 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z25_RS18365 (L2Z25_18360)	gspK	3813465..3814424 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z25_RS18370 (L2Z25_18365)	-	3814655..3815251 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z25_RS18375 (L2Z25_18370)	ung	3815302..3816015 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z25_RS18380 (L2Z25_18375)	-	3816012..3817136 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z25_RS18385 (L2Z25_18380)	tadA	3817143..3817646 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z25_RS18390 (L2Z25_18385)	-	3817716..3818159 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650053 L2Z25_RS18360 WP_000594589.1 3812764..3813465(+) (xcpW) [Acinetobacter baumannii strain AB212-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650053 L2Z25_RS18360 WP_000594589.1 3812764..3813465(+) (xcpW) [Acinetobacter baumannii strain AB212-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996