Detailed information NTG0650005

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z27_RS13825
• Genome accession: NZ_CP091349
• Coordinates: 2881290..2881991 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB213-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2876290..2886991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z27_RS13790 (L2Z27_13790)	kdsB	2876813..2877574 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z27_RS13795 (L2Z27_13795)	-	2877586..2878566 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z27_RS13800 (L2Z27_13800)	-	2878578..2878919 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z27_RS13805 (L2Z27_13805)	-	2878937..2879710 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z27_RS13810 (L2Z27_13810)	-	2879748..2880356 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z27_RS13815 (L2Z27_13815)	-	2880366..2880920 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z27_RS13820 (L2Z27_13820)	xcpV	2880910..2881290 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z27_RS13825 (L2Z27_13825)	xcpW	2881290..2881991 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z27_RS13830 (L2Z27_13830)	gspK	2881991..2882950 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z27_RS13835 (L2Z27_13835)	-	2883181..2883777 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z27_RS13840 (L2Z27_13840)	ung	2883828..2884541 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z27_RS13845 (L2Z27_13845)	-	2884538..2885662 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z27_RS13850 (L2Z27_13850)	tadA	2885669..2886172 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z27_RS13855 (L2Z27_13855)	-	2886242..2886685 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650005 L2Z27_RS13825 WP_000594589.1 2881290..2881991(+) (xcpW) [Acinetobacter baumannii strain AB213-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650005 L2Z27_RS13825 WP_000594589.1 2881290..2881991(+) (xcpW) [Acinetobacter baumannii strain AB213-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996