Detailed information NTG0649934

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z28_RS07770
• Genome accession: NZ_CP091348
• Coordinates: 1596870..1597571 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB214-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1591870..1602571

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z28_RS07735 (L2Z28_07735)	kdsB	1592393..1593154 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z28_RS07740 (L2Z28_07740)	-	1593166..1594146 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z28_RS07745 (L2Z28_07745)	-	1594158..1594499 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z28_RS07750 (L2Z28_07750)	-	1594517..1595290 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z28_RS07755 (L2Z28_07755)	-	1595328..1595936 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z28_RS07760 (L2Z28_07760)	-	1595946..1596500 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z28_RS07765 (L2Z28_07765)	xcpV	1596490..1596870 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z28_RS07770 (L2Z28_07770)	xcpW	1596870..1597571 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z28_RS07775 (L2Z28_07775)	gspK	1597571..1598530 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z28_RS07780 (L2Z28_07780)	-	1598761..1599357 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z28_RS07785 (L2Z28_07785)	ung	1599408..1600121 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z28_RS07790 (L2Z28_07790)	-	1600118..1601242 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z28_RS07795 (L2Z28_07795)	tadA	1601249..1601752 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z28_RS07800 (L2Z28_07800)	-	1601822..1602265 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=649934 L2Z28_RS07770 WP_000594589.1 1596870..1597571(+) (xcpW) [Acinetobacter baumannii strain AB214-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=649934 L2Z28_RS07770 WP_000594589.1 1596870..1597571(+) (xcpW) [Acinetobacter baumannii strain AB214-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996