Detailed information NTG0649840

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z30_RS08245
• Genome accession: NZ_CP091346
• Coordinates: 1665261..1665962 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB217-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1660261..1670962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z30_RS08210 (L2Z30_08210)	kdsB	1660784..1661545 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z30_RS08215 (L2Z30_08215)	-	1661557..1662537 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z30_RS08220 (L2Z30_08220)	-	1662549..1662890 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z30_RS08225 (L2Z30_08225)	-	1662908..1663681 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z30_RS08230 (L2Z30_08230)	-	1663719..1664327 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z30_RS08235 (L2Z30_08235)	-	1664337..1664891 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z30_RS08240 (L2Z30_08240)	xcpV	1664881..1665261 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z30_RS08245 (L2Z30_08245)	xcpW	1665261..1665962 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z30_RS08250 (L2Z30_08250)	gspK	1665962..1666921 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z30_RS08255 (L2Z30_08255)	-	1667152..1667748 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z30_RS08260 (L2Z30_08260)	ung	1667799..1668512 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z30_RS08265 (L2Z30_08265)	-	1668509..1669633 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z30_RS08270 (L2Z30_08270)	tadA	1669640..1670143 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z30_RS08275 (L2Z30_08275)	-	1670213..1670656 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=649840 L2Z30_RS08245 WP_000594589.1 1665261..1665962(+) (xcpW) [Acinetobacter baumannii strain AB217-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=649840 L2Z30_RS08245 WP_000594589.1 1665261..1665962(+) (xcpW) [Acinetobacter baumannii strain AB217-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996