Detailed information NTG0649628

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z35_RS12590
• Genome accession: NZ_CP091341
• Coordinates: 2559891..2560592 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB226-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2554891..2565592

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z35_RS12555 (L2Z35_12555)	kdsB	2555414..2556175 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z35_RS12560 (L2Z35_12560)	-	2556187..2557167 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z35_RS12565 (L2Z35_12565)	-	2557179..2557520 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z35_RS12570 (L2Z35_12570)	-	2557538..2558311 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z35_RS12575 (L2Z35_12575)	-	2558349..2558957 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z35_RS12580 (L2Z35_12580)	-	2558967..2559521 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z35_RS12585 (L2Z35_12585)	xcpV	2559511..2559891 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z35_RS12590 (L2Z35_12590)	xcpW	2559891..2560592 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z35_RS12595 (L2Z35_12595)	gspK	2560592..2561551 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z35_RS12600 (L2Z35_12600)	-	2561782..2562378 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z35_RS12605 (L2Z35_12605)	ung	2562429..2563142 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z35_RS12610 (L2Z35_12610)	-	2563139..2564263 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z35_RS12615 (L2Z35_12615)	tadA	2564270..2564773 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z35_RS12620 (L2Z35_12620)	-	2564843..2565286 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=649628 L2Z35_RS12590 WP_000594589.1 2559891..2560592(+) (xcpW) [Acinetobacter baumannii strain AB226-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=649628 L2Z35_RS12590 WP_000594589.1 2559891..2560592(+) (xcpW) [Acinetobacter baumannii strain AB226-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996