Detailed information NTG0649512

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z38_RS10150
• Genome accession: NZ_CP091339
• Coordinates: 2122472..2123173 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain AB229-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2117472..2128173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z38_RS10120 (L2Z38_10120)	-	2117779..2118222 (-)	444	WP_001246675.1	SRPBCC family protein	-
L2Z38_RS10125 (L2Z38_10125)	tadA	2118292..2118795 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
L2Z38_RS10130 (L2Z38_10130)	-	2118802..2119926 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z38_RS10135 (L2Z38_10135)	ung	2119923..2120636 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
L2Z38_RS10140 (L2Z38_10140)	-	2120687..2121283 (-)	597	WP_000908449.1	6-carboxytetrahydropterin synthase	-
L2Z38_RS10145 (L2Z38_10145)	gspK	2121513..2122472 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
L2Z38_RS10150 (L2Z38_10150)	xcpW	2122472..2123173 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z38_RS10155 (L2Z38_10155)	xcpV	2123173..2123553 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z38_RS10160 (L2Z38_10160)	-	2123543..2124097 (-)	555	WP_000841373.1	type II secretion system protein	-
L2Z38_RS10165 (L2Z38_10165)	-	2124107..2124715 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z38_RS10170 (L2Z38_10170)	-	2124753..2125526 (-)	774	WP_000497300.1	TatD family hydrolase	-
L2Z38_RS10175 (L2Z38_10175)	-	2125544..2125885 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
L2Z38_RS10180 (L2Z38_10180)	-	2125897..2126877 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
L2Z38_RS10185 (L2Z38_10185)	kdsB	2126889..2127650 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=649512 L2Z38_RS10150 WP_000594579.1 2122472..2123173(-) (xcpW) [Acinetobacter baumannii strain AB229-VUB]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=649512 L2Z38_RS10150 WP_000594579.1 2122472..2123173(-) (xcpW) [Acinetobacter baumannii strain AB229-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983