Detailed information NTG0649306

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z43_RS01990
• Genome accession: NZ_CP091334
• Coordinates: 425682..426383 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain ATCC19606-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 420682..431383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z43_RS01955 (L2Z43_01955)	kdsB	421205..421966 (+)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z43_RS01960 (L2Z43_01960)	-	421978..422958 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
L2Z43_RS01965 (L2Z43_01965)	-	422970..423311 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z43_RS01970 (L2Z43_01970)	-	423329..424102 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z43_RS01975 (L2Z43_01975)	-	424140..424748 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z43_RS01980 (L2Z43_01980)	-	424758..425312 (+)	555	WP_000841370.1	type II secretion system protein	-
L2Z43_RS01985 (L2Z43_01985)	xcpV	425302..425682 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z43_RS01990 (L2Z43_01990)	xcpW	425682..426383 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z43_RS01995 (L2Z43_01995)	gspK	426383..427342 (+)	960	WP_000301461.1	type II secretion system minor pseudopilin GspK	-
L2Z43_RS02000 (L2Z43_02000)	-	427572..428168 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
L2Z43_RS02005 (L2Z43_02005)	ung	428219..428932 (+)	714	WP_001177525.1	uracil-DNA glycosylase	-
L2Z43_RS02010 (L2Z43_02010)	-	428929..430053 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z43_RS02015 (L2Z43_02015)	tadA	430060..430563 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
L2Z43_RS02020 (L2Z43_02020)	-	430633..431076 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=649306 L2Z43_RS01990 WP_000594572.1 425682..426383(+) (xcpW) [Acinetobacter baumannii strain ATCC19606-VUB]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=649306 L2Z43_RS01990 WP_000594572.1 425682..426383(+) (xcpW) [Acinetobacter baumannii strain ATCC19606-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
TGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAACTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991