Detailed information NTG0648121

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2M54_RS08775
• Genome accession: NZ_CP091173
• Coordinates: 1793064..1793765 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain AB5116
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1788064..1798765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2M54_RS08740 (L2M54_08740)	kdsB	1788587..1789348 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2M54_RS08745 (L2M54_08745)	-	1789360..1790340 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
L2M54_RS08750 (L2M54_08750)	-	1790352..1790693 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2M54_RS08755 (L2M54_08755)	-	1790711..1791484 (+)	774	WP_000497302.1	TatD family hydrolase	-
L2M54_RS08760 (L2M54_08760)	-	1791522..1792130 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2M54_RS08765 (L2M54_08765)	-	1792140..1792694 (+)	555	WP_005128793.1	type II secretion system protein	-
L2M54_RS08770 (L2M54_08770)	xcpV	1792684..1793064 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2M54_RS08775 (L2M54_08775)	xcpW	1793064..1793765 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2M54_RS08780 (L2M54_08780)	gspK	1793765..1794724 (+)	960	WP_005128789.1	type II secretion system minor pseudopilin GspK	-
L2M54_RS08785 (L2M54_08785)	-	1794954..1795550 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2M54_RS08790 (L2M54_08790)	ung	1795601..1796314 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2M54_RS08795 (L2M54_08795)	-	1796311..1797435 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2M54_RS08800 (L2M54_08800)	tadA	1797442..1797945 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
L2M54_RS08805 (L2M54_08805)	-	1798015..1798458 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=648121 L2M54_RS08775 WP_004747380.1 1793064..1793765(+) (xcpW) [Acinetobacter baumannii strain AB5116]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=648121 L2M54_RS08775 WP_004747380.1 1793064..1793765(+) (xcpW) [Acinetobacter baumannii strain AB5116]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996