Detailed information NTG0648074

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LQS91_RS09605
• Genome accession: NZ_CP091172
• Coordinates: 1924903..1925604 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain MRSN57
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1919903..1930604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LQS91_RS09570 (LQS91_09570)	kdsB	1920426..1921187 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LQS91_RS09575 (LQS91_09575)	-	1921199..1922179 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
LQS91_RS09580 (LQS91_09580)	-	1922191..1922532 (+)	342	WP_001183027.1	PilZ domain-containing protein	-
LQS91_RS09585 (LQS91_09585)	-	1922550..1923323 (+)	774	WP_000497300.1	TatD family hydrolase	-
LQS91_RS09590 (LQS91_09590)	-	1923361..1923969 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
LQS91_RS09595 (LQS91_09595)	-	1923979..1924533 (+)	555	WP_000841373.1	type II secretion system protein	-
LQS91_RS09600 (LQS91_09600)	xcpV	1924523..1924903 (+)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
LQS91_RS09605 (LQS91_09605)	xcpW	1924903..1925604 (+)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
LQS91_RS09610 (LQS91_09610)	gspK	1925604..1926563 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
LQS91_RS09615 (LQS91_09615)	-	1926793..1927389 (+)	597	WP_000908449.1	6-carboxytetrahydropterin synthase	-
LQS91_RS09620 (LQS91_09620)	ung	1927440..1928153 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
LQS91_RS09625 (LQS91_09625)	-	1928150..1929274 (+)	1125	WP_003114973.1	enoyl-CoA hydratase/isomerase family protein	-
LQS91_RS09630 (LQS91_09630)	tadA	1929281..1929784 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
LQS91_RS09635 (LQS91_09635)	-	1929854..1930297 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=648074 LQS91_RS09605 WP_000594579.1 1924903..1925604(+) (xcpW) [Acinetobacter baumannii strain MRSN57]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=648074 LQS91_RS09605 WP_000594579.1 1924903..1925604(+) (xcpW) [Acinetobacter baumannii strain MRSN57]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983