Detailed information NTG0064766

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SCAZ3_RS02825
• Genome accession: NZ_AIDX01000001
• Coordinates: 614878..615810 (-)
• Length: 310 a.a.
• NCBI ID: WP_003045261.1
• Uniprot ID: A0AAV3FV95
• Organism: Streptococcus canis FSL Z3-227
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 609878..620810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCAZ3_RS02800 (SCAZ3_09825)	tsaD	610365..611381 (-)	1017	WP_003045249.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
SCAZ3_RS02805 (SCAZ3_09830)	rimI	611371..611796 (-)	426	WP_003045251.1	ribosomal protein S18-alanine N-acetyltransferase	-
SCAZ3_RS02810 (SCAZ3_09835)	tsaB	611798..612496 (-)	699	WP_003045253.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SCAZ3_RS02815 (SCAZ3_09840)	-	612781..613011 (+)	231	WP_003045256.1	DNA-dependent RNA polymerase subunit epsilon	-
SCAZ3_RS02820 (SCAZ3_09845)	rnjA	613013..614695 (+)	1683	WP_003045259.1	ribonuclease J1	-
SCAZ3_RS02825 (SCAZ3_09850)	amiF	614878..615810 (-)	933	WP_003045261.1	ABC transporter ATP-binding protein	Regulator
SCAZ3_RS02830 (SCAZ3_09855)	oppD	615807..616856 (-)	1050	WP_003045263.1	ABC transporter ATP-binding protein	Regulator
SCAZ3_RS02835 (SCAZ3_09860)	-	616868..617899 (-)	1032	WP_003045264.1	ABC transporter permease	-
SCAZ3_RS02840 (SCAZ3_09865)	-	617909..618823 (-)	915	WP_003045266.1	ABC transporter permease	-
SCAZ3_RS12375	-	619061..619504 (+)	444	Protein_567	transposase	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35178.04 Da
• Isoelectric Point: 6.7833

>NTDB_id=64766 SCAZ3_RS02825 WP_003045261.1 614878..615810(-) (amiF) [Streptococcus canis FSL Z3-227]
MNDNRKKLVALKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTTSKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTQCLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADHYRRDYR

Nucleotide

• Length: 933 bp

>NTDB_id=64766 SCAZ3_RS02825 WP_003045261.1 614878..615810(-) (amiF) [Streptococcus canis FSL Z3-227]
ATGAATGACAATCGAAAAAAATTAGTAGCCTTAAAAAATGTCTCCCTAACTTTCAATAAAGGCAAGAAAAACGAAGTTAA
GGCTATTGATAACGTTAGTTTTGATATTTATGAAGGCGAAGTCTTTGGACTGGTGGGGGAATCAGGGTCAGGGAAAACAA
CAGTTGGCCGTGCGATTCTGAAACTTTATGATATTAGTGAAGGAGAAATCATTTTTAATGGTGAAACTGTTTCTCACCTG
AAAGGGAAAGACTTGCGGACCTTCCGTAAGGATGCCCAAATGATTTTCCAAGACCCTCAGGCCAGTCTCAATGGTCGTAT
GAAAATTAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGCCTGACAACTTCAAAAGCAGAGCGAGAAGAGCGGGTGC
AAGAACTCCTTGACTTGGTTGGATTGAATAAGGACCATTTAACCCGTTACCCGCATGAATTTTCAGGAGGGCAACGTCAG
CGGATTGGGATTGCCCGCGCTTTGGCGGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
CATTCAGGCACAGGTGGTTAATTTGATGCAAAAACTTCAGCACAAACGTGGCTTGACCTATCTCTTTATTGCTCATGACT
TGTCCATGGTTAAATACATTTCTGACCGTATTGGCGTCATGCATTGGGGCAAAATGTTGGAGATTGGGACATCAGATGAT
GTTTACAATCATCCCATTCACCCCTACACCCAGTGTCTGCTTTCGGCTATTCCTGAGCCAGATCCTGACAAAGAACGGCA
ACGTGTGGCTGATGTTTACGACCCTAGTCAAGAATTGGACGGTCAGGAGCGCCAAATGCACGAAATTACCCCAGGGCATT
TTGTTTTAGCTACCCAAGAAGAAGCTGACCATTATCGACGTGACTATCGTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.115	98.387	0.523
amiF	Streptococcus thermophilus LMG 18311	52.787	98.387	0.519
amiF	Streptococcus salivarius strain HSISS4	52.459	98.387	0.516