Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OHN73_RS31265 Genome accession   NZ_CP107839
Coordinates   6745908..6747641 (-) Length   577 a.a.
NCBI ID   WP_266513880.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00519     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6740908..6752641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHN73_RS31255 (OHN73_31150) - 6742621..6743922 (+) 1302 WP_266513885.1 RNA polymerase sigma factor -
  OHN73_RS31260 (OHN73_31155) rcrQ 6743977..6745908 (-) 1932 WP_328550481.1 ABC transporter ATP-binding protein Regulator
  OHN73_RS31265 (OHN73_31160) rcrP 6745908..6747641 (-) 1734 WP_266513880.1 ABC transporter ATP-binding protein Regulator
  OHN73_RS31270 (OHN73_31165) - 6747757..6749199 (-) 1443 WP_328431432.1 FGGY family carbohydrate kinase -
  OHN73_RS31275 (OHN73_31170) - 6749284..6749589 (-) 306 WP_266513874.1 YtxH domain-containing protein -
  OHN73_RS31295 (OHN73_31190) - 6750425..6751174 (-) 750 WP_406321737.1 hypothetical protein -
  OHN73_RS31300 (OHN73_31195) - 6751341..6751811 (-) 471 WP_406321738.1 helix-turn-helix domain-containing protein -
  OHN73_RS31305 (OHN73_31200) - 6751960..6752277 (+) 318 WP_406321740.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62487.90 Da        Isoelectric Point: 6.9037

>NTDB_id=646846 OHN73_RS31265 WP_266513880.1 6745908..6747641(-) (rcrP) [Streptomyces sp. NBC_00519]
MLIRLLRTYLRPYKKPIALLVLLQLLQTCATLYLPTLNAHIIDQGVVKGDTGYILSFGALMIGISLVQVVCNIGAVYYGA
RTASALGRDLRASVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIVLALGLDVPLSGV
LIAVVPTLGICVTLIVRKLRPLFRAMQVRLDTVNRVLREQITGNRVIRAFVREEYEKDRFRKSNADLTEMQLKTGNLLAL
MFPVVMTTVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIEEVLGTSSSVVP
PAAPVTELRRHGHLEIRGAGFRYPGAEEPVLKAVDLVARPGEVTAVIGSTGSGKSTLLGLVPRLFDATDGQVLVDGTDVA
SLEPALLAKTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAKDFVQKLEAGLNAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALAQETAEATVVIVAQRVATIREADRIVVLDEGLVVGTGRHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=646846 OHN73_RS31265 WP_266513880.1 6745908..6747641(-) (rcrP) [Streptomyces sp. NBC_00519]
GTGCTCATACGACTTCTGCGGACCTACCTCAGGCCCTACAAGAAACCCATCGCCCTGCTGGTGCTGCTGCAGCTCCTGCA
GACCTGCGCCACCCTCTATCTGCCCACTCTGAACGCCCACATCATCGACCAAGGCGTCGTGAAGGGTGACACCGGCTACA
TCCTCTCCTTCGGCGCCCTGATGATCGGCATCTCACTGGTCCAGGTCGTGTGCAACATCGGTGCCGTGTACTACGGCGCC
CGCACCGCCTCCGCACTCGGCCGGGACCTGCGCGCGTCCGTGTTCGACCGGGTGCAGTCCTTCTCGGCGCGGGAGGTCGG
TCACTTCGGCGCGCCCTCGCTGATCACGCGTACGACCAATGACGTGCAGCAGGTCCAGATGCTGGCCCTGATGACGTTCA
CGCTGATGGTGTCGGCGCCGATCATGTGCGTGGGCGGCATCGTGCTGGCGCTCGGCCTGGACGTGCCGCTGTCCGGTGTG
CTGATCGCCGTGGTCCCGACGCTGGGCATCTGCGTCACGCTGATCGTGCGGAAGCTGCGACCGCTGTTCCGGGCCATGCA
GGTACGCCTGGACACGGTCAACCGGGTCCTGCGCGAGCAGATCACCGGCAACCGTGTGATCAGGGCCTTCGTGCGGGAGG
AGTACGAGAAGGACCGGTTCCGCAAGTCCAACGCCGACCTCACCGAGATGCAGCTGAAGACCGGCAACCTGCTCGCGCTG
ATGTTCCCGGTGGTCATGACCACGGTGAACCTGTCGTCGATCGCGGTGGTGTGGTTCGGCGCCCACCGGATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACCGCGTTTCTCGCCTACCTCATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGTGCCGAGCGGATCGAGGAGGTGCTCGGGACCTCCTCCAGCGTGGTGCCG
CCGGCGGCTCCGGTCACCGAGCTGCGCCGGCACGGTCACCTGGAGATCCGGGGTGCCGGGTTCCGCTATCCCGGCGCCGA
GGAGCCCGTGCTCAAGGCGGTCGACCTGGTCGCGCGGCCCGGCGAGGTGACCGCCGTCATCGGCTCGACGGGCAGTGGCA
AGTCGACGCTGCTGGGGCTCGTCCCGCGCCTGTTCGACGCCACCGACGGCCAGGTGCTCGTCGACGGCACGGACGTGGCG
TCCCTCGAACCGGCGCTGCTGGCGAAGACGGTCGGGCTGGTGCCGCAGAAGCCGTACCTGTTCGCCGGGACGGTCGCGAC
CAACCTGCGCTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGACTTCG
TGCAGAAACTCGAAGCCGGGCTCAACGCCCCGATCTCGCAGGGCGGCACGAACGTCTCCGGCGGTCAGCGGCAGCGACTC
GCCATCGCCCGGACGCTGGTGCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTACGCCACCGA
CGCGGCGCTGCGTGCGGCGCTCGCCCAGGAGACCGCGGAAGCGACCGTCGTGATCGTCGCCCAGCGGGTGGCGACCATCC
GCGAAGCGGACCGGATCGTCGTCCTCGACGAGGGGCTTGTCGTCGGGACCGGCCGCCATCACGAGCTGATGGCGGGCAAC
GAGACCTATCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.554

100

0.388