Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LZ178_RS08065 | Genome accession | NZ_CP090375 |
| Coordinates | 1699782..1700081 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain GD4SA108-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1694782..1705081
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ178_RS08040 (LZ178_08020) | gcvPA | 1695994..1697340 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| LZ178_RS08045 (LZ178_08025) | gcvT | 1697360..1698451 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LZ178_RS08050 (LZ178_08030) | - | 1698610..1699134 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| LZ178_RS08055 (LZ178_08035) | - | 1699124..1699270 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| LZ178_RS08060 (LZ178_08040) | comGF | 1699367..1699864 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LZ178_RS08065 (LZ178_08045) | comGE | 1699782..1700081 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| LZ178_RS08070 (LZ178_08050) | comGD | 1700068..1700514 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LZ178_RS08075 (LZ178_08055) | comGC | 1700492..1700803 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LZ178_RS08080 (LZ178_08060) | comGB | 1700817..1701887 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LZ178_RS08085 (LZ178_08065) | comGA | 1701859..1702833 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LZ178_RS08090 (LZ178_08070) | - | 1702885..1703508 (-) | 624 | WP_113587809.1 | MBL fold metallo-hydrolase | - |
| LZ178_RS08095 (LZ178_08075) | - | 1703505..1703834 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| LZ178_RS08100 (LZ178_08080) | - | 1703834..1704820 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| LZ178_RS08105 (LZ178_08085) | - | 1704817..1705020 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=641813 LZ178_RS08065 WP_000844413.1 1699782..1700081(-) (comGE) [Staphylococcus aureus strain GD4SA108-1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=641813 LZ178_RS08065 WP_000844413.1 1699782..1700081(-) (comGE) [Staphylococcus aureus strain GD4SA108-1]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |