Detailed information NTG0641607

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: LXN49_RS12330
• Genome accession: NZ_CP090354
• Coordinates: 2436117..2438501 (-)
• Length: 794 a.a.
• NCBI ID: WP_024423121.1
• Uniprot ID: -
• Organism: Bacillus safensis strain H31R-08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2431117..2443501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXN49_RS12295 (LXN49_12295)	-	2432117..2432845 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
LXN49_RS12300 (LXN49_12300)	-	2432859..2433668 (+)	810	WP_103131897.1	transporter substrate-binding domain-containing protein	-
LXN49_RS12305 (LXN49_12305)	-	2433746..2434399 (+)	654	WP_024423118.1	amino acid ABC transporter permease	-
LXN49_RS12310 (LXN49_12310)	-	2434415..2435065 (+)	651	WP_234107256.1	amino acid ABC transporter permease	-
LXN49_RS12315 (LXN49_12315)	-	2435168..2435299 (-)	132	WP_003216198.1	YrzQ family protein	-
LXN49_RS12320 (LXN49_12320)	-	2435320..2435511 (-)	192	WP_003216308.1	hypothetical protein	-
LXN49_RS12325 (LXN49_12325)	-	2435525..2436043 (-)	519	WP_234107257.1	PRC-barrel domain-containing protein	-
LXN49_RS12330 (LXN49_12330)	recD2	2436117..2438501 (-)	2385	WP_024423121.1	ATP-dependent RecD-like DNA helicase	Machinery gene
LXN49_RS12335 (LXN49_12335)	-	2438521..2439174 (-)	654	WP_056767976.1	tetratricopeptide repeat protein	-
LXN49_RS12340 (LXN49_12340)	mnmA	2439234..2440352 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
LXN49_RS12345 (LXN49_12345)	-	2440447..2441589 (-)	1143	WP_044331688.1	cysteine desulfurase family protein	-
LXN49_RS12350 (LXN49_12350)	cymR	2441608..2442027 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
LXN49_RS12355 (LXN49_12355)	-	2442236..2443501 (+)	1266	WP_056767979.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89073.59 Da
• Isoelectric Point: 5.2068

>NTDB_id=641607 LXN49_RS12330 WP_024423121.1 2436117..2438501(-) (recD2) [Bacillus safensis strain H31R-08]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=641607 LXN49_RS12330 WP_024423121.1 2436117..2438501(-) (recD2) [Bacillus safensis strain H31R-08]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCATTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTCACGAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGCATCATACATTATCTCTCAAGTGATTTATT
TGAAGGGATAGGGAAAAAGACGGCGGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGGATCGGGTTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGCGAGTTGGAGGAGCGGTTAGGCGTTCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGAAGGGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCTTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCTATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTCAGGAGCTACTACCGAATGCTTCGGCGGAATCTACTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATTATGGATGCAGAACTTGAAGCACTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798