Detailed information NTG0640225

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FH104_RS10175
• Genome accession: NZ_CP090014
• Coordinates: 2039822..2042245 (+)
• Length: 807 a.a.
• NCBI ID: WP_054105781.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain acrlk
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2034822..2047245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FH104_RS10145 (FH104_10120)	cymR	2034829..2035251 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
FH104_RS10150 (FH104_10125)	-	2035361..2035504 (+)	144	WP_017176172.1	SAS049 family protein	-
FH104_RS10155 (FH104_10130)	-	2035603..2036607 (-)	1005	WP_049382006.1	LLM class flavin-dependent oxidoreductase	-
FH104_RS10160 (FH104_10135)	-	2036807..2037946 (+)	1140	WP_017176174.1	cysteine desulfurase family protein	-
FH104_RS10165 (FH104_10140)	mnmA	2037950..2039062 (+)	1113	WP_054105783.1	tRNA 2-thiouridine(34) synthase MnmA	-
FH104_RS10170 (FH104_10145)	-	2039149..2039820 (+)	672	WP_070519282.1	tetratricopeptide repeat protein	-
FH104_RS10175 (FH104_10150)	recD2	2039822..2042245 (+)	2424	WP_054105781.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FH104_RS10180 (FH104_10155)	alaS	2042525..2045155 (+)	2631	WP_054105780.1	alanine--tRNA ligase	-
FH104_RS10185 (FH104_10160)	-	2045220..2045480 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
FH104_RS10190 (FH104_10165)	ruvX	2045481..2045909 (+)	429	WP_017176179.1	Holliday junction resolvase RuvX	-
FH104_RS10195 (FH104_10170)	-	2045924..2046238 (+)	315	WP_017176180.1	DUF1292 domain-containing protein	-
FH104_RS10200 (FH104_10175)	-	2046499..2047134 (+)	636	WP_025987143.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91690.04 Da
• Isoelectric Point: 4.7254

>NTDB_id=640225 FH104_RS10175 WP_054105781.1 2039822..2042245(+) (recD2) [Staphylococcus hominis strain acrlk]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKSKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKILENNPYQLVYDVKGIGFQKADTLARNNGITYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQEQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKII
EQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=640225 FH104_RS10175 WP_054105781.1 2039822..2042245(+) (recD2) [Staphylococcus hominis strain acrlk]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAACTGCCTCAAACTAAAGATGCCATAATAAGTTATTTATCTAGTGATTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTCGAAA
ACGTTCCTAGTTTAGCAAAATCGAAACAAAAACAGATTGCAGAACAAATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCCATGGCGATTTATCAATTTTATCAATCAGAGACTTTAAAAAT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTACTTATAACGATTCAGAACGTTTAAAAGCTGGGTTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGA
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAAGAACAATTAAAACATGTGCTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAACACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAAATAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTAACTGGAGGTCCAGGAACAGGTAAAACAACTGTTATTAAAGGGA
TTGTAGAATTGTATGCTGAAATTCATGGTCTATCTCTTAAGTATTCCGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGGGCATCAAAACGTTTACAAGAATCAACTGGATTAGAAGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAAAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCATCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATTATTCTAGTAGGCGATGAAGAT
CAATTGCCGTCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGTATTATTGACTTAGCTCATCGCATGAAACATCATGAGTCAATAGATATTACAA
AACGTTATCACGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACCGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAAAGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTTAATCGACCAAATGACAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTT
TGGGCTAAAGAAAATGCACTTAATAAAGATGTACTGATTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGATCAGAATTCCCAATTGTTATTATGCCTA
TTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAAGCATTTGACATTGCCTTAAATACTCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGACGTAGAAGAGAATGATGAACCGATAAATATAGATGATACAGAGGATA
ATAATGCAGATGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCA
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• AAA domain (AAA_30) (340-545)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.378	99.628	0.492