Detailed information NTG0640207

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ODQ18_RS01890
• Genome accession: NZ_CP107039
• Coordinates: 364104..365369 (-)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 11060
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 359104..370369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ODQ18_RS01865 (ODQ18_01865)	yrzK	359347..359517 (+)	171	WP_004399157.1	YrzK family protein	-
ODQ18_RS01870 (ODQ18_01870)	hisS	359899..361173 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
ODQ18_RS01875 (ODQ18_01875)	aspS	361187..362965 (+)	1779	WP_015714438.1	aspartate--tRNA ligase	-
ODQ18_RS01885 (ODQ18_01885)	tcdA	363300..364064 (+)	765	WP_014480428.1	ThiF family adenylyltransferase	-
ODQ18_RS01890 (ODQ18_01890)	rarA	364104..365369 (-)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
ODQ18_RS01895 (ODQ18_01895)	cymR	365572..365988 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ODQ18_RS01900 (ODQ18_01900)	iscSA	366007..367146 (+)	1140	WP_041850172.1	cysteine desulfurase family protein	-
ODQ18_RS01905 (ODQ18_01905)	mnmA	367177..368292 (+)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
ODQ18_RS01910 (ODQ18_01910)	yrrB	368378..368998 (+)	621	WP_010886584.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=640207 ODQ18_RS01890 WP_014480427.1 364104..365369(-) (rarA) [Bacillus subtilis strain 11060]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=640207 ODQ18_RS01890 WP_014480427.1 364104..365369(-) (rarA) [Bacillus subtilis strain 11060]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993