Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | U712_RS11735 | Genome accession | NC_022898 |
| Coordinates | 2370519..2370854 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis PY79 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2365519..2375854
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U712_RS11715 (U712_11995) | gcvT | 2366111..2367199 (-) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| U712_RS11720 (U712_12000) | hepAA | 2367641..2369314 (+) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| U712_RS11725 (U712_12005) | yqhG | 2369335..2370129 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| U712_RS11730 (U712_12010) | sinI | 2370312..2370485 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| U712_RS11735 (U712_12015) | sinR | 2370519..2370854 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| U712_RS11740 (U712_12020) | tasA | 2370947..2371732 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| U712_RS11745 (U712_12025) | sipW | 2371796..2372368 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| U712_RS11750 (U712_12030) | tapA | 2372352..2373113 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| U712_RS11755 (U712_12035) | yqzG | 2373385..2373711 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| U712_RS11760 (U712_12040) | spoIITA | 2373753..2373932 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| U712_RS11765 (U712_12045) | comGG | 2374003..2374377 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| U712_RS11770 (U712_12050) | comGF | 2374378..2374761 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| U712_RS11775 (U712_12055) | comGE | 2374787..2375134 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| U712_RS11780 (U712_12060) | comGD | 2375118..2375549 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| U712_RS11785 (U712_12065) | comGC | 2375539..2375835 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=63750 U712_RS11735 WP_003226345.1 2370519..2370854(+) (sinR) [Bacillus subtilis PY79]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=63750 U712_RS11735 WP_003226345.1 2370519..2370854(+) (sinR) [Bacillus subtilis PY79]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |