Detailed information NTG0063727

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: F6Y14_RS02080
• Genome accession: NZ_AP020322
• Coordinates: 374576..375850 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102729.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KUH180129
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 369576..380850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6Y14_RS02055 (KUH180129_0372)	hisS	370137..371399 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
F6Y14_RS02060 (KUH180129_0373)	aspS	371415..373181 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
F6Y14_RS02070	-	373514..373642 (+)	129	WP_001790559.1	hypothetical protein	-
F6Y14_RS02075 (KUH180129_0374)	-	373642..374415 (+)	774	WP_000682646.1	ThiF family adenylyltransferase	-
F6Y14_RS02080 (KUH180129_0375)	rarA	374576..375850 (-)	1275	WP_000102729.1	replication-associated recombination protein A	Machinery gene
F6Y14_RS02085 (KUH180129_0376)	cymR	375935..376357 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
F6Y14_RS02090 (KUH180129_0377)	-	376457..376639 (+)	183	WP_000752909.1	CsbD family protein	-
F6Y14_RS02095 (KUH180129_0378)	-	376679..376825 (+)	147	WP_000009238.1	SAS049 family protein	-
F6Y14_RS02100 (KUH180129_0379)	-	377062..378075 (-)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
F6Y14_RS02110 (KUH180129_0380)	-	378378..379550 (+)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47222.80 Da
• Isoelectric Point: 8.3526

>NTDB_id=63727 F6Y14_RS02080 WP_000102729.1 374576..375850(-) (rarA) [Staphylococcus aureus strain KUH180129]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=63727 F6Y14_RS02080 WP_000102729.1 374576..375850(-) (rarA) [Staphylococcus aureus strain KUH180129]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684