Detailed information NTG0634780

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LSO58_RS10360
• Genome accession: NZ_CP089044
• Coordinates: 2163931..2164719 (-)
• Length: 262 a.a.
• NCBI ID: WP_227546592.1
• Uniprot ID: -
• Organism: Acinetobacter ursingii strain RIVM_C010761
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2158931..2169719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSO58_RS10330 (LSO58_10295)	-	2159245..2159682 (-)	438	WP_026039912.1	SRPBCC family protein	-
LSO58_RS10335 (LSO58_10300)	tadA	2159795..2160316 (-)	522	WP_104794995.1	tRNA adenosine(34) deaminase TadA	-
LSO58_RS10340 (LSO58_10305)	-	2160320..2161444 (-)	1125	WP_004989425.1	enoyl-CoA hydratase/isomerase family protein	-
LSO58_RS10345 (LSO58_10310)	ung	2161441..2162154 (-)	714	WP_004989427.1	uracil-DNA glycosylase	-
LSO58_RS10350 (LSO58_10315)	-	2162202..2162798 (-)	597	WP_004989429.1	6-pyruvoyl trahydropterin synthase family protein	-
LSO58_RS10355 (LSO58_10320)	gspK	2162960..2163925 (-)	966	WP_263503522.1	type II secretion system minor pseudopilin GspK	-
LSO58_RS10360 (LSO58_10325)	xcpW	2163931..2164719 (-)	789	WP_227546592.1	type II secretion system protein GspJ	Machinery gene
LSO58_RS10365 (LSO58_10330)	gspI	2164986..2165609 (-)	624	WP_126624345.1	type II secretion system minor pseudopilin GspI	-
LSO58_RS10370 (LSO58_10335)	-	2165596..2166096 (-)	501	WP_010588711.1	type II secretion system protein	-
LSO58_RS10375 (LSO58_10340)	-	2166344..2166952 (-)	609	WP_004989445.1	TetR/AcrR family transcriptional regulator	-
LSO58_RS10380 (LSO58_10345)	-	2166996..2167769 (-)	774	WP_004989446.1	TatD family hydrolase	-
LSO58_RS10385 (LSO58_10350)	-	2167786..2168127 (-)	342	WP_004989449.1	PilZ domain-containing protein	-
LSO58_RS10390 (LSO58_10355)	-	2168140..2169108 (-)	969	WP_004989450.1	DNA polymerase III subunit delta'	-

Sequence

Protein

• Length: 262 a.a.
• Molecular weight: 29404.40 Da
• Isoelectric Point: 9.2430

>NTDB_id=634780 LSO58_RS10360 WP_227546592.1 2163931..2164719(-) (xcpW) [Acinetobacter ursingii strain RIVM_C010761]
MLLRLSVARLKPRDSKHSSSPCAAAKRCFANRCSGFTLVELLVAIAIFAVLSALGWKVFDYLIKTKDRNAQHEEQLFILQ
DAYQQILRDTLQIIPLTANMNGQMRPALSLNNNVLQFSKAGVTDPLGQGVSPYERIEYRYDASQKVVYRLKYSDLNLPNS
AQPQSSILLKNVEQFQINVLNPQALNQWPDASLDFTQTQNLKLLPAGLKINVTMAGTEYEWIYSLLDTKAIVLKQQQNDA
SSNNNNSTNNTNHNSTNQTGQN

Nucleotide

• Length: 789 bp

>NTDB_id=634780 LSO58_RS10360 WP_227546592.1 2163931..2164719(-) (xcpW) [Acinetobacter ursingii strain RIVM_C010761]
TTGCTTCTCAGATTGAGCGTTGCTCGATTAAAACCTCGCGACTCGAAGCATAGCTCCTCACCTTGCGCAGCGGCAAAACG
ATGTTTTGCTAATCGCTGCTCAGGATTTACGTTGGTTGAGCTTTTGGTCGCGATTGCGATATTTGCAGTATTGTCTGCAT
TAGGTTGGAAAGTTTTTGATTATCTCATCAAGACTAAAGATCGAAATGCTCAGCACGAAGAGCAACTTTTTATTTTACAA
GACGCATATCAGCAAATTTTGCGAGATACTCTACAGATCATTCCACTTACGGCAAATATGAATGGGCAAATGCGTCCAGC
ATTATCACTGAATAATAACGTACTCCAGTTTAGCAAAGCTGGTGTGACTGATCCATTAGGGCAGGGGGTATCGCCCTATG
AGCGGATTGAGTATCGCTATGATGCTTCGCAGAAAGTAGTCTATCGCTTAAAATATTCAGATTTGAATTTACCCAATAGT
GCACAGCCTCAATCCAGTATCCTATTGAAAAATGTGGAACAGTTTCAAATTAATGTATTGAATCCTCAGGCTTTAAATCA
ATGGCCTGATGCAAGTTTAGATTTTACTCAGACTCAAAATTTAAAACTTCTGCCCGCAGGTTTAAAAATTAATGTCACCA
TGGCAGGAACTGAATATGAATGGATTTACAGCTTATTGGATACTAAAGCTATTGTTTTAAAGCAGCAACAAAATGATGCA
TCAAGCAACAATAATAATTCAACGAATAATACCAATCACAATTCCACTAATCAGACTGGACAGAATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (31-54)

• Type II secretion system (T2SS), protein J (T2SSJ) (88-217)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	64.423	79.389	0.511