Detailed information NTG0634739

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LSO59_RS10420
• Genome accession: NZ_CP089038
• Coordinates: 2212443..2213231 (-)
• Length: 262 a.a.
• NCBI ID: WP_227546592.1
• Uniprot ID: -
• Organism: Acinetobacter ursingii strain RIVM_C011601
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2207443..2218231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSO59_RS10390 (LSO59_10365)	-	2207757..2208194 (-)	438	WP_026039912.1	SRPBCC family protein	-
LSO59_RS10395 (LSO59_10370)	tadA	2208307..2208828 (-)	522	WP_004989424.1	tRNA adenosine(34) deaminase TadA	-
LSO59_RS10400 (LSO59_10375)	-	2208832..2209956 (-)	1125	WP_004989425.1	enoyl-CoA hydratase/isomerase family protein	-
LSO59_RS10405 (LSO59_10380)	ung	2209953..2210666 (-)	714	WP_004989427.1	uracil-DNA glycosylase	-
LSO59_RS10410 (LSO59_10385)	-	2210714..2211310 (-)	597	WP_004989429.1	6-pyruvoyl trahydropterin synthase family protein	-
LSO59_RS10415 (LSO59_10390)	gspK	2211472..2212437 (-)	966	WP_004989430.1	type II secretion system minor pseudopilin GspK	-
LSO59_RS10420 (LSO59_10395)	xcpW	2212443..2213231 (-)	789	WP_227546592.1	type II secretion system protein GspJ	Machinery gene
LSO59_RS10425 (LSO59_10400)	gspI	2213498..2214121 (-)	624	WP_126624345.1	type II secretion system minor pseudopilin GspI	-
LSO59_RS10430 (LSO59_10405)	-	2214108..2214608 (-)	501	WP_010588711.1	type II secretion system protein	-
LSO59_RS10435 (LSO59_10410)	-	2214856..2215464 (-)	609	WP_004989445.1	TetR/AcrR family transcriptional regulator	-
LSO59_RS10440 (LSO59_10415)	-	2215508..2216281 (-)	774	WP_004989446.1	TatD family hydrolase	-
LSO59_RS10445 (LSO59_10420)	-	2216298..2216639 (-)	342	WP_004989449.1	PilZ domain-containing protein	-
LSO59_RS10450 (LSO59_10425)	-	2216652..2217620 (-)	969	WP_004989450.1	DNA polymerase III subunit delta'	-

Sequence

Protein

• Length: 262 a.a.
• Molecular weight: 29404.40 Da
• Isoelectric Point: 9.2430

>NTDB_id=634739 LSO59_RS10420 WP_227546592.1 2212443..2213231(-) (xcpW) [Acinetobacter ursingii strain RIVM_C011601]
MLLRLSVARLKPRDSKHSSSPCAAAKRCFANRCSGFTLVELLVAIAIFAVLSALGWKVFDYLIKTKDRNAQHEEQLFILQ
DAYQQILRDTLQIIPLTANMNGQMRPALSLNNNVLQFSKAGVTDPLGQGVSPYERIEYRYDASQKVVYRLKYSDLNLPNS
AQPQSSILLKNVEQFQINVLNPQALNQWPDASLDFTQTQNLKLLPAGLKINVTMAGTEYEWIYSLLDTKAIVLKQQQNDA
SSNNNNSTNNTNHNSTNQTGQN

Nucleotide

• Length: 789 bp

>NTDB_id=634739 LSO59_RS10420 WP_227546592.1 2212443..2213231(-) (xcpW) [Acinetobacter ursingii strain RIVM_C011601]
TTGCTTCTCAGATTGAGCGTTGCTCGATTAAAACCTCGCGACTCGAAGCATAGCTCCTCACCTTGCGCAGCGGCAAAACG
ATGTTTTGCTAATCGCTGCTCAGGATTTACGTTGGTTGAGCTTTTGGTCGCGATTGCGATATTTGCAGTATTGTCTGCAT
TAGGTTGGAAAGTTTTTGATTATCTCATCAAGACTAAAGATCGAAATGCTCAGCACGAAGAGCAACTTTTTATTTTACAA
GACGCATATCAGCAAATTTTGCGAGATACTCTACAGATCATTCCACTTACGGCAAATATGAATGGGCAAATGCGTCCAGC
ATTATCACTGAATAATAACGTACTCCAGTTTAGCAAAGCTGGTGTGACTGATCCATTAGGGCAGGGGGTATCGCCCTATG
AGCGGATTGAGTATCGCTATGATGCTTCGCAGAAAGTAGTCTATCGCTTAAAATATTCAGATTTGAATTTACCCAATAGT
GCACAGCCTCAATCCAGTATCCTATTGAAAAATGTGGAACAGTTTCAAATTAATGTATTGAATCCTCAGGCTTTAAATCA
ATGGCCTGATGCAAGTTTAGATTTTACTCAGACTCAAAATTTAAAACTTCTGCCCGCAGGTTTAAAAATTAATGTCACCA
TGGCAGGAACTGAATATGAATGGATTTACAGCTTATTGGATACTAAAGCTATTGTTTTAAAGCAGCAACAAAATGATGCA
TCAAGCAACAATAATAATTCAACGAATAATACCAATCACAATTCCACTAATCAGACTGGACAGAATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (31-54)

• Type II secretion system (T2SS), protein J (T2SSJ) (88-217)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	64.423	79.389	0.511