Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG   Type   Machinery gene
Locus tag   SAGCMC97051_RS01555 Genome accession   NZ_AP020310
Coordinates   246402..246773 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae strain GCMC97051     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 241402..251773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAGCMC97051_RS01505 (SAGCMC97051_02420) - 241402..242298 (+) 897 WP_001061853.1 sensor histidine kinase -
  SAGCMC97051_RS01510 (SAGCMC97051_02430) - 242292..242591 (+) 300 WP_000258211.1 STAS-like domain-containing protein -
  SAGCMC97051_RS01515 (SAGCMC97051_02440) - 242701..242901 (+) 201 WP_000076712.1 CsbD family protein -
  SAGCMC97051_RS01520 (SAGCMC97051_02450) - 242982..243233 (-) 252 WP_050196899.1 hypothetical protein -
  SAGCMC97051_RS01525 (SAGCMC97051_02460) - 243373..243519 (-) 147 WP_001030870.1 hypothetical protein -
  SAGCMC97051_RS01530 (SAGCMC97051_02470) - 243670..243879 (+) 210 WP_000424774.1 helix-turn-helix domain-containing protein -
  SAGCMC97051_RS01535 (SAGCMC97051_02480) - 243962..244786 (+) 825 WP_001125980.1 DUF3825 domain-containing protein -
  SAGCMC97051_RS01540 (SAGCMC97051_02490) - 245153..245698 (+) 546 WP_001870774.1 exotoxin beta-grasp domain-containing protein -
  SAGCMC97051_RS01545 (SAGCMC97051_02500) - 245706..245846 (+) 141 WP_161512414.1 hypothetical protein -
  SAGCMC97051_RS01550 (SAGCMC97051_02510) comGF/cglF 246002..246424 (+) 423 WP_001264244.1 competence type IV pilus minor pilin ComGF Machinery gene
  SAGCMC97051_RS01555 (SAGCMC97051_02520) comGG 246402..246773 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  SAGCMC97051_RS01560 (SAGCMC97051_02530) comGH 246888..247862 (+) 975 WP_001008574.1 class I SAM-dependent methyltransferase Machinery gene
  SAGCMC97051_RS01565 (SAGCMC97051_02540) - 247894..249087 (+) 1194 WP_000047534.1 acetate kinase -
  SAGCMC97051_RS01570 (SAGCMC97051_02550) - 249239..249445 (+) 207 WP_000798241.1 helix-turn-helix transcriptional regulator -
  SAGCMC97051_RS11560 - 249513..249641 (+) 129 WP_014959723.1 hypothetical protein -
  SAGCMC97051_RS01575 (SAGCMC97051_02560) - 249682..250137 (+) 456 WP_000905673.1 hypothetical protein -
  SAGCMC97051_RS01580 (SAGCMC97051_02570) - 250206..250871 (+) 666 WP_000008113.1 CPBP family intramembrane glutamic endopeptidase -
  SAGCMC97051_RS01585 (SAGCMC97051_02580) proC 250892..251662 (-) 771 WP_001865901.1 pyrroline-5-carboxylate reductase -

Sequence


Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=63181 SAGCMC97051_RS01555 WP_000601104.1 246402..246773(+) (comGG) [Streptococcus agalactiae strain GCMC97051]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=63181 SAGCMC97051_RS01555 WP_000601104.1 246402..246773(+) (comGG) [Streptococcus agalactiae strain GCMC97051]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366

  comGG Streptococcus mutans UA159

44.554

82.114

0.366


Multiple sequence alignment