Detailed information NTG0631209

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LPS07_RS10550
• Genome accession: NZ_CP087716
• Coordinates: 2178983..2179738 (-)
• Length: 251 a.a.
• NCBI ID: WP_032057017.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP2044
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2173983..2184738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPS07_RS10520 (LPS07_10520)	-	2174292..2174732 (-)	441	WP_002121449.1	SRPBCC family protein	-
LPS07_RS10525 (LPS07_10525)	tadA	2174803..2175306 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
LPS07_RS10530 (LPS07_10530)	hibch	2175312..2176436 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
LPS07_RS10535 (LPS07_10535)	ung	2176433..2177146 (-)	714	WP_069119298.1	uracil-DNA glycosylase	-
LPS07_RS10540 (LPS07_10540)	-	2177200..2177796 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
LPS07_RS10545 (LPS07_10545)	gspK	2178024..2178982 (-)	959	Protein_2053	type II secretion system minor pseudopilin GspK	-
LPS07_RS10550 (LPS07_10550)	xcpW	2178983..2179738 (-)	756	WP_032057017.1	type II secretion system minor pseudopilin GspJ	Machinery gene
LPS07_RS10555 (LPS07_10555)	xcpV	2179738..2180118 (-)	381	WP_032057019.1	type II secretion system minor pseudopilin GspI	Machinery gene
LPS07_RS10560 (LPS07_10560)	-	2180108..2180662 (-)	555	WP_005069534.1	type II secretion system protein	-
LPS07_RS10565 (LPS07_10565)	-	2180669..2181277 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
LPS07_RS10570 (LPS07_10570)	ycfH	2181314..2182087 (-)	774	WP_017399499.1	TatD family hydrolase	-
LPS07_RS10575 (LPS07_10575)	pilZ	2182105..2182446 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
LPS07_RS10580 (LPS07_10580)	holB	2182457..2183437 (-)	981	WP_230444988.1	DNA polymerase III subunit delta'	-
LPS07_RS10585 (LPS07_10585)	kdsB	2183451..2184212 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28696.96 Da
• Isoelectric Point: 9.5669

>NTDB_id=631209 LPS07_RS10550 WP_032057017.1 2178983..2179738(-) (xcpW) [Acinetobacter pittii strain AP2044]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=631209 LPS07_RS10550 WP_032057017.1 2178983..2179738(-) (xcpW) [Acinetobacter pittii strain AP2044]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAATTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797